Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_J19
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   3.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   3.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   4.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   4.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.6  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +2

Query: 20  VDFLTIVILP-CFFKNVKASLFYKI 91
           VD+L  +  P CFFKN K   F+++
Sbjct: 81  VDWLHNIWRPDCFFKNAKKVTFHEM 105


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 550 LLSFASSRYLSPHFLNILQYHVTMPVESLH 639
           LLS    +Y++P     L+ H T  V +LH
Sbjct: 306 LLSVLGYKYITPLIQKHLKIHDTCGVHNLH 335


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 509 NILEMNLSLFTALPFFPLPVLGTSVHIS 592
           + LEM + +F   P +P P++     IS
Sbjct: 60  HFLEMGVDMFWLSPIYPSPMVDFGYDIS 87


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 509 NILEMNLSLFTALPFFPLPVLGTSVHIS 592
           + LEM + +F   P +P P++     IS
Sbjct: 60  HFLEMGVDMFWLSPIYPSPMVDFGYDIS 87


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
 Frame = +1

Query: 514 FGDEFVLVYSFALLSFASSRYLS------PHFLNILQYHVTMPVESLHSTQKFLIV 663
           FG+ F ++ SFA  + A++  L+        ++ I    ++  +  L    KF+IV
Sbjct: 122 FGEAFCIIQSFAAETSANATVLTITAFTVERYIAICHPFISHTMSKLSRAVKFIIV 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,900
Number of Sequences: 438
Number of extensions: 4517
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)