Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_J17
(610 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 1.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 1.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 1.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 1.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 1.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 1.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 1.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 1.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 1.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 1.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 1.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 9.4
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.4
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 21 9.4
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 95 NNNYNNYNKHNYNKLYYNINY 115
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 328 NNNYNNYNKHNYNKLYYNINY 348
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N +N+L++N ++
Sbjct: 328 NNNYNNYNKHNYNKLYYNINY 348
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 604 IFXWITTPAIFLFLASIILKA 542
+F WI T A+ + A IIL+A
Sbjct: 521 LFLWIFTLAVLVGTAGIILQA 541
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 604 IFXWITTPAIFLFLASIILKA 542
+F WI T A+ + A IIL+A
Sbjct: 521 LFLWIFTLAVLVGTAGIILQA 541
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 604 IFXWITTPAIFLFLASIILKA 542
+F WI T A+ + A IIL+A
Sbjct: 516 LFLWIFTLAVVVGTAGIILQA 536
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +2
Query: 137 NNTFTNRNDVPWNRLHFNFSF 199
NN + N N + +L++N ++
Sbjct: 93 NNNYNNNNYNNYKKLYYNINY 113
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 604 IFXWITTPAIFLFLASIILKA 542
IF WI T A L IIL+A
Sbjct: 549 IFLWIFTVACVLGTVLIILQA 569
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 252 IEIGFVRRRSEYKK 293
++I F RRS+YKK
Sbjct: 25 VKIWFQNRRSKYKK 38
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,908
Number of Sequences: 438
Number of extensions: 3231
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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