Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_J12
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 160 8e-40
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 31 0.84
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 31 0.84
U39678-2|AAL16315.1| 133|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.1
U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z75543-6|CAA99873.3| 499|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 28 7.8
U39678-3|AAL16316.1| 137|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 28 7.8
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 160 bits (389), Expect = 8e-40
Identities = 79/210 (37%), Positives = 134/210 (63%), Gaps = 2/210 (0%)
Frame = -3
Query: 726 ISXEQFGRIHVHVDNKDSRPLQLQTHPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKW 547
I +F I + ++N + QLQ HPN+DK+ ++S+ + +K +P+P++SDVG+LKW
Sbjct: 310 IGSPEFIPISIKMNNGSAAGTQLQVHPNLDKKEWQSSSTLKIKPNGKPYPVNSDVGILKW 369
Query: 546 RLATTNDDKLAPLSVNCWPSEGVNGGCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVV 367
++A + +++L P+S NCWP E + G VNIEY L+++ + L +V I +PLP+ T+ V
Sbjct: 370 KMALSEEEQL-PISFNCWPQES-SDGVQVNIEYTLQREDITLNNVRIIVPLPTA-TAPSV 426
Query: 366 HQWEGSYT-QKGRN-LIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALL 193
+ +G Y K +N ++WS+ ++ +G+LEF+V + FFP+SV +TSE +
Sbjct: 427 GECDGEYEYHKTKNVIVWSLAVIDSSNSSGTLEFSVPNGHCDHFFPVSVGFTSENLFVPI 486
Query: 192 TAVKVTQAEDGSPVDFSQEISFHADKYEFV 103
T KV + DGSPV +S E +F+++ +E V
Sbjct: 487 TVQKVVK-NDGSPVTYSVETTFNSENFEIV 515
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 366 HQWEGSYTQKGRNLIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLS 229
H+ +G YT+K + ++ + KQ++ +E T+ ND F LS
Sbjct: 447 HRKDGQYTKKSKMILGQVQQRQKQEEDEQMESTMAQFTDNDPFNLS 492
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 366 HQWEGSYTQKGRNLIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLS 229
H+ +G YT+K + ++ + KQ++ +E T+ ND F LS
Sbjct: 447 HRKDGQYTKKSKMILGQVQQRQKQEEDEQMESTMAQFTDNDPFNLS 492
>U39678-2|AAL16315.1| 133|Caenorhabditis elegans Hypothetical
protein C39D10.8a protein.
Length = 133
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 483 GVNGGCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQ-WEGSYTQKGRNLIWSIPL 307
G+ G N E+++E TD ITI SV+ H+ WEG Y Q R+ I +P
Sbjct: 67 GLGPGTTKNSEFKVEH-----TDNVITIRCKYRVQSVLAHETWEGEYIQYWRSEIGQMPK 121
Query: 306 VSKQQ 292
+ + +
Sbjct: 122 IIRDE 126
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 300 CSRAECSR*GCVPSACSYPPTGAPPPK-CCQ 389
CS + CS +P AC PP PPPK CCQ
Sbjct: 56 CSSSCCSSQKPIPLACCPPP---PPPKPCCQ 83
>U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical
protein ZK1248.7 protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 250 GYRRSDGELKTPGFLLFAHERNAPDEVASLLRVATLPLVHHHRSVA 387
G+ G KTP + + A + NAP L T L HHH+ VA
Sbjct: 284 GHTTLQGTAKTPLYTILADDCNAP---MDRLEELTYTLCHHHQIVA 326
>Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical
protein F33A8.7 protein.
Length = 168
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = +1
Query: 361 LVHHHRSVARRKRYGDIDICQHQVILLQLVFDIDVTSSVDAFGRPTVYGKRSQLVIVGSG 540
L+H HR+ ++ + DI ++I LQ + D +V + + + S+LV S
Sbjct: 45 LLHRHRTERQKIEKVNNDIRDARLIKLQQILDSPAPQNVTLIATQSDFSRISRLVHPVSN 104
Query: 541 QPPLEDSD-----VAVHREGALSLLQPNHAGR 621
+P + D + VHR A Q + A +
Sbjct: 105 KPVTDSVDELNKVLGVHRRQARKGAQSDAAAQ 136
>Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3b protein.
Length = 634
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 519 LAPLSVNCWPSEGVNGGCDVNIE 451
LA +VNCWP + G DV++E
Sbjct: 153 LANATVNCWPVVCIGGTADVDLE 175
>Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3a protein.
Length = 634
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 519 LAPLSVNCWPSEGVNGGCDVNIE 451
LA +VNCWP + G DV++E
Sbjct: 153 LANATVNCWPVVCIGGTADVDLE 175
>Z75543-6|CAA99873.3| 499|Caenorhabditis elegans Hypothetical
protein K01D12.6 protein.
Length = 499
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 564 RRCASGRGVEPASAQSRRSS 623
RR SGRG+ P S+Q RSS
Sbjct: 75 RRSQSGRGMRPPSSQGERSS 94
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 278 RLPV-FCCLLTSGMLQMRLRPFCV*LPSH 361
R+PV +C L +G+L L PFCV +P +
Sbjct: 225 RIPVAYCKQLINGLLIQTLIPFCVYIPPY 253
>U39678-3|AAL16316.1| 137|Caenorhabditis elegans Hypothetical
protein C39D10.8b protein.
Length = 137
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 420 TDVNITIPLPSGNTSVVVHQ-WEGSYTQKGRNLIWSIPLVSKQQ 292
TD ITI SV+ H+ WEG Y Q R+ I +P + + +
Sbjct: 87 TDNVITIRCKYRVQSVLAHETWEGEYIQYWRSEIGQMPKIIRDE 130
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/43 (20%), Positives = 26/43 (60%)
Frame = +1
Query: 328 VASLLRVATLPLVHHHRSVARRKRYGDIDICQHQVILLQLVFD 456
V++L + +PL++++ + + +ID C+H+ + L + ++
Sbjct: 26 VSTLTCIIAIPLLYNYMQHVQTNLHSEIDFCRHRTVGLFIQYE 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,129,420
Number of Sequences: 27780
Number of extensions: 422090
Number of successful extensions: 1380
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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