Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_J07
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   8.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   8.7  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 566 GNYSGVFLALISLLCMFNIP 625
           G+YS V L + +LL +F+IP
Sbjct: 76  GSYSSVSLQVANLLRLFHIP 95



 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 90  KVFRLLRLWHLTKMGPMLLSKAV 22
           +V  LLRL+H+ ++ P   +KA+
Sbjct: 84  QVANLLRLFHIPQISPASTAKAL 106


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 566 GNYSGVFLALISLLCMFNIP 625
           G+YS V L + +LL +F+IP
Sbjct: 166 GSYSSVSLQVANLLRLFHIP 185



 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 90  KVFRLLRLWHLTKMGPMLLSKAV 22
           +V  LLRL+H+ ++ P   +KA+
Sbjct: 174 QVANLLRLFHIPQISPASTAKAL 196


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 601 TYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTG 488
           TY G E+ G+V  T IY Y  + G +T     +  N G
Sbjct: 389 TYYG-EEIGMVDNTTIYKYDVRDGCRTPFQWDNSINAG 425


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 144 YLFDV*KLNFCXYNFYLDKVFRL 76
           Y+ DV +     Y+F+ D  FR+
Sbjct: 326 YVSDVFRYGLLIYDFFKDSSFRI 348


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 143 YQHENVFINHS 175
           Y+H+NVF+ +S
Sbjct: 281 YEHQNVFVKNS 291


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,323
Number of Sequences: 438
Number of extensions: 3450
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)