Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_J02
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0691 - 5224260-5224277,5224663-5224733,5224774-5224953,522...    31   1.3  
04_04_0092 - 22759791-22760676,22761446-22761813,22762202-227622...    29   3.0  
08_02_0873 + 22100124-22100810                                         29   5.3  
01_01_0114 - 851249-852372,852577-852740,852838-853568                 29   5.3  
08_02_0491 + 17749763-17750143,17750694-17750751,17750846-177508...    28   7.0  
11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118     28   9.2  

>07_01_0691 -
           5224260-5224277,5224663-5224733,5224774-5224953,
           5226391-5227072
          Length = 316

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +2

Query: 311 IVVFFDPKQENSQTHRA*HHAEVGLMYLASVFCFQ-LHQINLVYLSFCLLITHICTNFSL 487
           +++ +DP+  +    +  H AEVG MY  S+   Q  H  NL++  F      I   F++
Sbjct: 193 LLLIYDPRTSSFAEVKMRHLAEVG-MYTGSLLSLQNAHLDNLIFYEF----RKIAAEFAI 247

Query: 488 LQICSPSVSLGL 523
             IC  S  L +
Sbjct: 248 KDICGLSYFLSI 259


>04_04_0092 -
           22759791-22760676,22761446-22761813,22762202-22762207,
           22763365-22763603,22764808-22765339
          Length = 676

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 575 GLHQEDDKIASSTIFFKEFFVH*ICAYAEYLLQYAEITHHQKTIK 709
           G+H +D KI S+T+FF E   H I  +  YL  +    H  K ++
Sbjct: 577 GIHFDDRKI-STTLFFAELLEHPIIYFQVYLTAF-HCVHSNKILR 619


>08_02_0873 + 22100124-22100810
          Length = 228

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -1

Query: 329 GQKRQRCKYPGCKGNTFISC-DKCCVELCLNKCNNCFRSF 213
           G +R  C YPGC         D+ C  +  ++C  C R F
Sbjct: 115 GARRTYCPYPGCSEMMVADADDEGCAGVTQSECQACRRLF 154


>01_01_0114 - 851249-852372,852577-852740,852838-853568
          Length = 672

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -1

Query: 491 EVGKSLCICGLSI--NKKRGRPSLSDEVENKRQRPNTSILPPRDVRRDG 351
           E+ K LC+ GL     K   RP++S+ +E      N   +PPR    DG
Sbjct: 593 ELQKKLCLVGLWCIQMKSHDRPTMSETIEMLEGDVNALQVPPRPFFCDG 641


>08_02_0491 +
           17749763-17750143,17750694-17750751,17750846-17750891,
           17750932-17750998,17751100-17751108
          Length = 186

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 398 SVFCFQLHQINLVYLSFCLLITHIC 472
           S+F F + Q  L YLS C++  H+C
Sbjct: 131 SLFNFIVQQFALKYLSDCIIARHVC 155


>11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118
          Length = 325

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -1

Query: 332 WGQKRQRCKYPGCKGNTFISCDKCCVELCLNKC 234
           W  K  +C++P C      S   CC   C  +C
Sbjct: 292 WKIKLPKCRFPKCCAFKLPSPSSCCSCSCFRRC 324


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,513,403
Number of Sequences: 37544
Number of extensions: 376601
Number of successful extensions: 900
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)