Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_J02
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   3.0  
U43588-1|AAC46972.1|  395|Drosophila melanogaster geranylgeranyl...    29   5.2  
U43587-1|AAC46971.1|  395|Drosophila melanogaster geranylgeranyl...    29   5.2  
BT024988-1|ABE01218.1|  239|Drosophila melanogaster IP11805p pro...    29   5.2  
AY119246-1|AAM51106.1|  395|Drosophila melanogaster SD20823p pro...    29   5.2  
AE014134-3130|AAF53825.1|  239|Drosophila melanogaster CG10337-P...    29   5.2  
AE014134-811|AAF52177.1|  395|Drosophila melanogaster CG3469-PA ...    29   5.2  
AF533772-1|AAN39288.1|  582|Drosophila melanogaster transposase ...    29   6.8  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -1

Query: 329   GQKRQRCKYPGCKGNTFISCDKCCV-ELCLNKC 234
             G   +RC+  GC  N     DK C  E C+N C
Sbjct: 22088 GNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPC 22120


>U43588-1|AAC46972.1|  395|Drosophila melanogaster geranylgeranyl
           transferase beta-subunit type I protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -1

Query: 593 HLLDVTLVNC---WLLYRRVGEQQHIPTPMKPKDYKFEVGKSLCI 468
           H LD T V     WL++R++   Q  P       Y F +G SLCI
Sbjct: 228 HRLDATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWIGASLCI 272


>U43587-1|AAC46971.1|  395|Drosophila melanogaster geranylgeranyl
           transferase beta-subunit type I protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -1

Query: 593 HLLDVTLVNC---WLLYRRVGEQQHIPTPMKPKDYKFEVGKSLCI 468
           H LD T V     WL++R++   Q  P       Y F +G SLCI
Sbjct: 228 HRLDATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWIGASLCI 272


>BT024988-1|ABE01218.1|  239|Drosophila melanogaster IP11805p
           protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 434 VYLSFCLLITHICTNFSLLQICSPSVSLGLVYAAALRLFCTI 559
           +Y  FC LI+H+      + I    + L LV+ A    +CTI
Sbjct: 13  LYFGFCTLISHVLLAGITVAIVYKCLVLKLVHTAGHAFYCTI 54


>AY119246-1|AAM51106.1|  395|Drosophila melanogaster SD20823p
           protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -1

Query: 593 HLLDVTLVNC---WLLYRRVGEQQHIPTPMKPKDYKFEVGKSLCI 468
           H LD T V     WL++R++   Q  P       Y F +G SLCI
Sbjct: 228 HRLDATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWIGASLCI 272


>AE014134-3130|AAF53825.1|  239|Drosophila melanogaster CG10337-PA
           protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 434 VYLSFCLLITHICTNFSLLQICSPSVSLGLVYAAALRLFCTI 559
           +Y  FC LI+H+      + I    + L LV+ A    +CTI
Sbjct: 13  LYFGFCTLISHVLLAGITVAIVYKCLVLKLVHTAGHAFYCTI 54


>AE014134-811|AAF52177.1|  395|Drosophila melanogaster CG3469-PA
           protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -1

Query: 593 HLLDVTLVNC---WLLYRRVGEQQHIPTPMKPKDYKFEVGKSLCI 468
           H LD T V     WL++R++   Q  P       Y F +G SLCI
Sbjct: 228 HRLDATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWIGASLCI 272


>AF533772-1|AAN39288.1|  582|Drosophila melanogaster transposase
           protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 473 TNFSLLQICSPSVSLGLVYAAALRLFCTITSN*QGLHQEDDKIASSTIFF 622
           T F L+++C  + +L    AAA++   T   N Q LH+   ++A+ST  F
Sbjct: 187 TRFELMRVCLATQTLSHTVAAAIK---TCNQNKQ-LHRNSSEVAASTAAF 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,428,391
Number of Sequences: 53049
Number of extensions: 694053
Number of successful extensions: 1573
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)