Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_I23
         (380 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071733-1|AAL49355.1|   77|Drosophila melanogaster RH45008p pro...    53   1e-07
AE014298-1291|AAF46455.1|   77|Drosophila melanogaster CG9034-PA...    53   1e-07
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot...    28   4.7  
BT022515-1|AAY54931.1|  187|Drosophila melanogaster IP07908p pro...    28   4.7  
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro...    28   4.7  
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot...    28   4.7  
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P...    28   4.7  
AE014297-637|AAF54142.2|  187|Drosophila melanogaster CG10919-PA...    28   4.7  

>AY071733-1|AAL49355.1|   77|Drosophila melanogaster RH45008p
           protein.
          Length = 77

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 26/58 (44%), Positives = 30/58 (51%)
 Frame = -1

Query: 239 QGWNEIPEIFASTXXXXXXXXXXXXGAYNYVKNDGDNRRYKGTYVVMRPDDPRVKLIR 66
           + WNEIP+I   +            G  NY   DGDNRRYK  YVV R DDPR   +R
Sbjct: 15  RAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVVYRHDDPRALKVR 72


>AE014298-1291|AAF46455.1|   77|Drosophila melanogaster CG9034-PA
           protein.
          Length = 77

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 26/58 (44%), Positives = 30/58 (51%)
 Frame = -1

Query: 239 QGWNEIPEIFASTXXXXXXXXXXXXGAYNYVKNDGDNRRYKGTYVVMRPDDPRVKLIR 66
           + WNEIP+I   +            G  NY   DGDNRRYK  YVV R DDPR   +R
Sbjct: 15  RAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVVYRHDDPRALKVR 72


>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 protein.
          Length = 1228

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 222  DLVPSLXELAVQAIFSKPQPFIYACRPYFKSIELLNIFS 338
            DLVP      +  +F KP  F+Y+C P F    L+ +F+
Sbjct: 893  DLVPDYRLRPIIRVFFKP--FVYSCPPSFYDSVLVPLFA 929


>BT022515-1|AAY54931.1|  187|Drosophila melanogaster IP07908p
           protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 92  PASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLL 205
           P  S HR P    CL R   +   +E+ DQ+++++ LL
Sbjct: 93  PTFSKHRIPLQIRCLERYHNS--KREYADQFKREIKLL 128


>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p protein.
          Length = 1241

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 222  DLVPSLXELAVQAIFSKPQPFIYACRPYFKSIELLNIFS 338
            DLVP      +  +F KP  F+Y+C P F    L+ +F+
Sbjct: 900  DLVPDYRLRPIIRVFFKP--FVYSCPPSFYDSVLVPLFA 936


>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 protein.
          Length = 1241

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 222  DLVPSLXELAVQAIFSKPQPFIYACRPYFKSIELLNIFS 338
            DLVP      +  +F KP  F+Y+C P F    L+ +F+
Sbjct: 900  DLVPDYRLRPIIRVFFKP--FVYSCPPSFYDSVLVPLFA 936


>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
            protein.
          Length = 1241

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 222  DLVPSLXELAVQAIFSKPQPFIYACRPYFKSIELLNIFS 338
            DLVP      +  +F KP  F+Y+C P F    L+ +F+
Sbjct: 900  DLVPDYRLRPIIRVFFKP--FVYSCPPSFYDSVLVPLFA 936


>AE014297-637|AAF54142.2|  187|Drosophila melanogaster CG10919-PA
           protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 92  PASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLL 205
           P  S HR P    CL R   +   +E+ DQ+++++ LL
Sbjct: 93  PTFSKHRIPLQIRCLERYHNS--KREYADQFKREIKLL 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,957,020
Number of Sequences: 53049
Number of extensions: 251449
Number of successful extensions: 671
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)