Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_I07
         (737 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76159-1|AAA95939.1|  258|Homo sapiens FRG1 protein.                  141   3e-33
BC053997-1|AAH53997.1|  258|Homo sapiens FSHD region gene 1 prot...   141   3e-33
AF146191-1|AAD46768.1|  258|Homo sapiens FRG1 protein.                141   3e-33
AL441988-1|CAC27358.1|  182|Homo sapiens chromosome 20 open read...   109   1e-23
AK057099-1|BAB71366.1|  163|Homo sapiens protein ( Homo sapiens ...    74   5e-13
AK055615-1|BAB70972.1|  134|Homo sapiens protein ( Homo sapiens ...    62   2e-09
BC017921-1|AAH17921.1|  123|Homo sapiens Unknown (protein for MG...    53   9e-07

>L76159-1|AAA95939.1|  258|Homo sapiens FRG1 protein.
          Length = 258

 Score =  141 bits (341), Expect = 3e-33
 Identities = 75/147 (51%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
 Frame = -3

Query: 669 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 490
           YGKYLG++ DG+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+      D + AKS +
Sbjct: 113 YGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKT 171

Query: 489 AGENEYCIIRSNKAKEVNKA-VLPAXXXXXXXXXXXXXVKKFQKFQDKKLRLNDGSVTEL 313
           AGE E   IRS   +E  K   +P              VKKFQ FQD KL+++      L
Sbjct: 172 AGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQDHKLKISKEDSKIL 231

Query: 312 KRAKIEGNLHETLLDRRSKMKADRYCK 232
           K+A+ +G LHETLLDRR+K+KADRYCK
Sbjct: 232 KKARKDGFLHETLLDRRAKLKADRYCK 258


>BC053997-1|AAH53997.1|  258|Homo sapiens FSHD region gene 1
           protein.
          Length = 258

 Score =  141 bits (341), Expect = 3e-33
 Identities = 75/147 (51%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
 Frame = -3

Query: 669 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 490
           YGKYLG++ DG+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+      D + AKS +
Sbjct: 113 YGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKT 171

Query: 489 AGENEYCIIRSNKAKEVNKA-VLPAXXXXXXXXXXXXXVKKFQKFQDKKLRLNDGSVTEL 313
           AGE E   IRS   +E  K   +P              VKKFQ FQD KL+++      L
Sbjct: 172 AGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQDHKLKISKEDSKIL 231

Query: 312 KRAKIEGNLHETLLDRRSKMKADRYCK 232
           K+A+ +G LHETLLDRR+K+KADRYCK
Sbjct: 232 KKARKDGFLHETLLDRRAKLKADRYCK 258


>AF146191-1|AAD46768.1|  258|Homo sapiens FRG1 protein.
          Length = 258

 Score =  141 bits (341), Expect = 3e-33
 Identities = 75/147 (51%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
 Frame = -3

Query: 669 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 490
           YGKYLG++ DG+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+      D + AKS +
Sbjct: 113 YGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKT 171

Query: 489 AGENEYCIIRSNKAKEVNKA-VLPAXXXXXXXXXXXXXVKKFQKFQDKKLRLNDGSVTEL 313
           AGE E   IRS   +E  K   +P              VKKFQ FQD KL+++      L
Sbjct: 172 AGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQDHKLKISKEDSKIL 231

Query: 312 KRAKIEGNLHETLLDRRSKMKADRYCK 232
           K+A+ +G LHETLLDRR+K+KADRYCK
Sbjct: 232 KKARKDGFLHETLLDRRAKLKADRYCK 258


>AL441988-1|CAC27358.1|  182|Homo sapiens chromosome 20 open reading
           frame 80 protein.
          Length = 182

 Score =  109 bits (261), Expect = 1e-23
 Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
 Frame = -3

Query: 669 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 490
           YGKYLG++ D +V G SDA+GP EQWEPV+Q+GK A+L+S + F+      D + AKS +
Sbjct: 46  YGKYLGINSDELV-GHSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKT 103

Query: 489 AGENEYCIIRSNKAKEVNKA-VLPAXXXXXXXXXXXXXVKKFQKFQDKKLRLNDGSVTEL 313
           AGE E   IRS   KE  K   +P              VKKFQ FQD KL+++      L
Sbjct: 104 AGEEEMIKIRSCAEKETKKKDDIPEEDKGNVKQCEINYVKKFQSFQDHKLKISKEESKIL 163

Query: 312 KRAKIEGNLHETLLDR 265
           K+A+ +G LHETLLDR
Sbjct: 164 KKAQKDGFLHETLLDR 179


>AK057099-1|BAB71366.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32537 fis, clone SMINT2000400, highly similar to
           Homo sapiens FRG1 mRNA. ).
          Length = 163

 Score = 74.1 bits (174), Expect = 5e-13
 Identities = 35/65 (53%), Positives = 49/65 (75%)
 Frame = -3

Query: 669 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 490
           YGKYLG++ D +VVGRSDA+GP EQWEPV++ GK A+ +S + F+  +  +D + AKS +
Sbjct: 50  YGKYLGINSDELVVGRSDAIGPREQWEPVFKIGKMALSTSNSCFIRYSEAED-IEAKSKT 108

Query: 489 AGENE 475
           AGE E
Sbjct: 109 AGEEE 113


>AK055615-1|BAB70972.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31053 fis, clone HSYRA2000640, highly similar to
           Homo sapiens FRG1 mRNA. ).
          Length = 134

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -3

Query: 594 WEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIRSNKAKEVNKAV-LPA 418
           WE   + GK A+L+S   F+      D + AKS +AGE E   IRS   +E  K   +P 
Sbjct: 16  WELHTKKGKMALLASNGCFIRCNEAGD-IEAKSKTAGEEEMIKIRSCAERETKKKDDIPE 74

Query: 417 XXXXXXXXXXXXXVKKFQKFQDKKLRLNDGSVTELKRAKIEGNLHETLLDR 265
                        VKKFQ FQ+ KL+++      LK+A+ +G LHETLLDR
Sbjct: 75  EDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLHETLLDR 125


>BC017921-1|AAH17921.1|  123|Homo sapiens Unknown (protein for
           MGC:23868) protein.
          Length = 123

 Score = 53.2 bits (122), Expect = 9e-07
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
 Frame = -3

Query: 564 AILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIRSNKAKEVNKAV-LPAXXXXXXXXXX 388
           A+L+S   F+      D + AKS +AGE E   IRS   +E  K   +P           
Sbjct: 2   ALLASNGCFIRCNEAGD-IEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCE 60

Query: 387 XXXVKKFQKFQDKKLRLNDGSVTELKRAKIEGNLHETLLD 268
              VKKFQ FQ+ KL+++      LK+A+ +G LHETLLD
Sbjct: 61  INYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLHETLLD 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,479,726
Number of Sequences: 237096
Number of extensions: 1703904
Number of successful extensions: 3258
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3247
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)