Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_I06
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF588628-1|ABQ96818.1|  176|Anopheles gambiae transposase protein.     24   5.4  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   7.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.4  

>EF588628-1|ABQ96818.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -1

Query: 189 KCNFCLKIF-CIYGIINQMKLHV 124
           KC +CLK+F    G I+ +K H+
Sbjct: 23  KCLYCLKVFKYTKGTISNLKRHL 45


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 418 KTTVK*QYYFVILLKKNPKKN 480
           KT    +  F+I L KNP+KN
Sbjct: 65  KTNAHIEKIFLITLNKNPQKN 85


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 352  LYFRLHFVHLKYLNYVLKRNTTKTTVK 432
            +Y RLH +HL + + V +++T    ++
Sbjct: 938  MYARLHLLHLNWKHEVHRQSTIDVLIE 964


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 352  LYFRLHFVHLKYLNYVLKRNTTKTTVK 432
            +Y RLH +HL + + V +++T    ++
Sbjct: 939  MYARLHLLHLNWKHEVHRQSTIDVLIE 965


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,812
Number of Sequences: 2352
Number of extensions: 11315
Number of successful extensions: 223
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)