Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_I06
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    25   0.93 
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    25   0.93 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   2.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.8  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   5.0  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   5.0  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   6.6  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   8.7  

>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 309 NKNTNKKKVYFNFITVFSI 365
           N N N KK+Y+N I +  I
Sbjct: 315 NNNYNSKKLYYNIINIEQI 333


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 309 NKNTNKKKVYFNFITVFSI 365
           N N N KK+Y+N I +  I
Sbjct: 326 NNNYNSKKLYYNIINIEQI 344


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 309 NKNTNKKKVYFNFITVFSI 365
           N N N KK+Y+N I +  I
Sbjct: 346 NYNNNCKKLYYNIINIEQI 364


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 343 LKYTFFLFVFLFARC 299
           +KY  F+F F+FA C
Sbjct: 8   IKYLLFIFNFVFAVC 22


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 309 NKNTNKKKVYFNFITVFSI 365
           N N   KK+Y+N I +  I
Sbjct: 104 NNNNYNKKLYYNIINIEQI 122


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 309 NKNTNKKKVYFNFITVFSI 365
           N N   KK+Y+N I +  I
Sbjct: 104 NNNNYNKKLYYNIINIEQI 122


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 306 ANKNTNKKKVYFNFITVFSIALCSL 380
           ANK+T+K +   NFI  FS  L  +
Sbjct: 121 ANKSTDKCENGLNFIICFSKLLSDM 145


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 309 NKNTNKKKVYFNFITVFSI 365
           N N N K +Y+N I +  I
Sbjct: 326 NYNNNYKPLYYNIINIEQI 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,862
Number of Sequences: 438
Number of extensions: 3164
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)