Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_I05
(688 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 64 1e-10
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 62 4e-10
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 53 2e-07
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 52 3e-07
11_06_0759 + 27008772-27009571,27010457-27010576,27011683-270119... 31 0.86
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 31 1.1
04_04_0648 - 26936123-26936447,26936540-26936841,26937043-269379... 30 1.5
04_03_1003 - 21631188-21631274,21631939-21632043,21632171-216322... 30 1.5
10_08_0444 + 17971724-17971797,17972119-17972176,17972613-179727... 30 2.0
07_01_0025 - 172742-173260,174559-174621,174701-174763,174852-17... 29 2.6
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 29 3.5
03_06_0672 + 35443883-35444051,35444151-35444482 29 3.5
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 29 3.5
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 28 6.0
08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821 28 6.0
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 28 8.0
07_03_0504 - 18842442-18844668,18845418-18845428 28 8.0
02_02_0179 + 7500647-7500779,7503021-7503222,7503356-7503427,750... 28 8.0
01_06_1147 + 34892415-34893702,34894051-34894676 28 8.0
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 28 8.0
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 64.1 bits (149), Expect = 1e-10
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Frame = -3
Query: 680 IPXAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 507
+P GY + TD+ T+ ER +KGSIT + + +P DD+T P P T +
Sbjct: 304 VPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQ 363
Query: 506 TVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDII 339
+ R + IYP ++ L S SR+M I +H +V+ + K +Q +
Sbjct: 364 IYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMK 423
Query: 338 AILGMDELSEEDKLTVARARKIQR-FLSQ 255
A++G + LS ED L + K +R F++Q
Sbjct: 424 AVVGEEALSSEDLLYLEFLDKFERKFVTQ 452
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 62.1 bits (144), Expect = 4e-10
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Frame = -3
Query: 680 IPXAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 507
+P GY + TD+ T+ ER + GSIT + + +P DD+T P P T +
Sbjct: 334 VPGRRGYPGYMYTDLATIYERAGRIEGRSGSITQIPILTMPNDDITHPTPDLTGYITEGQ 393
Query: 506 TVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDII 339
+ R + IYP ++ L S SR+M I +H +V+ + K +Q +
Sbjct: 394 IYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMK 453
Query: 338 AILGMDELSEEDKLTVARARKIQR-FLSQ 255
A++G + LS ED L + K +R F++Q
Sbjct: 454 AVVGEEALSSEDLLYLEFLDKFERKFVTQ 482
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Frame = -3
Query: 680 IPXAVGYQPTLATDMGTMQERI-------TTTKKGSITSVQAIYVPADDLTDPAPATTFA 522
+P GY LA + + ER + + GS+T V A+ P D +DP + T +
Sbjct: 374 MPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLS 433
Query: 521 HLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHY--------NVARGVQKILQ 366
+ L + +A+ +P+V+ L S S+ HY ++ +++LQ
Sbjct: 434 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKIPTALEPHYEREDPDFIDIRTKAREVLQ 493
Query: 365 DYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 255
L +I+ ++G D L+E DK+T+ A+ ++ +L+Q
Sbjct: 494 REDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQ 531
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Frame = -3
Query: 680 IPXAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYVPADDLTDPAPATTFA 522
+P GY LA + + ER K GS+T V A+ P D +DP + T +
Sbjct: 388 MPADSGYPAYLAARLASFYERAGKVKCLGSPDRTGSVTIVGAVSPPGGDFSDPVTSATLS 447
Query: 521 HLDATTVLSRAIAELGIYPAVDPLDSTSRIMDP-----NIIGAEHYNVARGVQKILQDYK 357
+ L + +A+ +P+V+ L S S+ + ++ +++LQ
Sbjct: 448 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEKFDQDFIDIRTKAREVLQRED 507
Query: 356 SLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 255
L +I+ ++G D L+E DK+T+ A+ ++ +L+Q
Sbjct: 508 DLNEIVQLVGKDALAESDKITLETAKLLREDYLAQ 542
>11_06_0759 +
27008772-27009571,27010457-27010576,27011683-27011957,
27012516-27013783
Length = 820
Score = 31.1 bits (67), Expect = 0.86
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Frame = +3
Query: 177 GESFDSFLKWY*FTRMSSEHLSYLER------L*EEPLNFTCTCHCQLVFFRQLVHTQNS 338
G +FD + W F + L YLE + P TC V R LVH Q+S
Sbjct: 704 GFTFDCRVPWVTFKEEAMPSLQYLELKLYAGPAGKIPSGITCLPCLTKVILRYLVHYQSS 763
Query: 339 NNVLQGFVVLKNFLNSTCNIVVLSSN 416
+V ++ + N++VLS N
Sbjct: 764 ASVQDTISKMRKESSEHPNMIVLSQN 789
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -3
Query: 653 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLS 495
TL T + T IT T G V+ + +PA L P P+ T LDA VLS
Sbjct: 50 TLTTQVCTSWVGITCTPDGR--RVRELRLPAVGLFGPIPSDTLGKLDALQVLS 100
>04_04_0648 -
26936123-26936447,26936540-26936841,26937043-26937915,
26937995-26938108,26938285-26938612,26938719-26938843,
26938926-26938991,26939099-26939166,26939262-26939343,
26939433-26939546,26939647-26939747,26940429-26940678
Length = 915
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +3
Query: 474 TQFSNGSGEYSGSIQVSKSGGWSRISQVISWYINSLYRCDGTFLGGGNSFLHSTHVSSQS 653
+++S S +SG + ++S S+IS S I RC T GGN L S+ V S S
Sbjct: 476 SRYSVSSPPFSGMLPTNRSDHLSQISNEDSDDICKEVRCIETNETGGNECLESSAVGSNS 535
>04_03_1003 -
21631188-21631274,21631939-21632043,21632171-21632248,
21632337-21632411,21632908-21632994,21633091-21633158,
21633478-21633565,21633684-21633784,21633831-21633990,
21635088-21635246,21635351-21635527
Length = 394
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 429 HDTGS*VKRIHSWVDTQFSNGSGEYSGSIQVSKSGG---WSRISQVISWYINSL 581
HD+G+ K I W +NGS + ++ + G +SR +++W +N+L
Sbjct: 118 HDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGNITFSRFRFLVAWLVNAL 171
>10_08_0444 +
17971724-17971797,17972119-17972176,17972613-17972708,
17972974-17973000,17973019-17973075,17973604-17973687,
17974304-17974384,17974928-17975071,17975218-17975309,
17975998-17976079,17976818-17977000,17977360-17977438,
17977555-17977613,17978162-17978290,17979188-17979367,
17980312-17980446,17980528-17980602,17980890-17980947,
17981035-17981282,17981594-17981733,17981961-17982132,
17982797-17982887,17983099-17983221,17984951-17985032,
17985715-17985835,17985886-17985915,17986427-17986549
Length = 940
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 537 WSRISQVISWYINSLYRCDGTFLGGGNSFLH 629
W R V Y+ SLYRCD L S H
Sbjct: 421 WPRFKTVFDMYLQSLYRCDTKLLWVDGSHPH 451
>07_01_0025 -
172742-173260,174559-174621,174701-174763,174852-174950,
175792-175818,175946-176251
Length = 358
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/101 (21%), Positives = 45/101 (44%)
Frame = +3
Query: 360 VVLKNFLNSTCNIVVLSSNNIRVHDTGS*VKRIHSWVDTQFSNGSGEYSGSIQVSKSGGW 539
VVL+ + + ++ ++++ H+ ++HS + +S S +Y ++ S S
Sbjct: 160 VVLRKMIVQEVKMNLVDTSSVNFHNPIDKKSKVHSKTEPSYSRFSTKYFSTVLSSLSPDQ 219
Query: 540 SRISQVISWYINSLYRCDGTFLGGGNSFLHSTHVSSQSRLI 662
RI + + NSL D ++ S + HV +S I
Sbjct: 220 KRI--IGDYGFNSLLMFDNAYVPNKFSSWIANHVDVKSSQI 258
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 220 ACPVNTSATWKGCERNL*ILRARATVNLSSSDNSSI 327
A P+ +S TWKG E L +++ R + + DN I
Sbjct: 42 AFPLVSSPTWKGIEHGLELVKQRIIWRVGNGDNIKI 77
>03_06_0672 + 35443883-35444051,35444151-35444482
Length = 166
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 395 VARGVQKILQDYKSLQDIIAILGMDELSEEDK 300
VA GVQ++++ KSL I A+ +E EE++
Sbjct: 84 VATGVQRLIKGIKSLSQIFAMYDDEEEDEEER 115
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 139 LLANDHSPLXRILENPLIVSSSGTSLPACPVNTSATWKGCERNL*ILR 282
L+A +S R+L+ + S A P NTS TWKG E L +L+
Sbjct: 414 LIAEPNSLCARLLKAKYYPNGSLIDT-AFPSNTSPTWKGIEHGLELLK 460
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 656 PTLATD--MGTMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 531
P L TD T + TT S+ SVQ P D +T P P +
Sbjct: 421 PRLFTDGQQPTQSAQQTTNVPSSVGSVQTTPFPVDSITGPTPCS 464
>08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821
Length = 716
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 554 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPL--DSTSRIMDPNIIGAEHYNVARGV 381
L + A T LDA+ L +A I + PL D S + PN GAE N+AR +
Sbjct: 514 LLESAEDTALDILDASDELGLFLARAVIDDVLAPLNLDEISGKLPPNCSGAETLNMARSL 573
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 632 TMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 531
T E+ TT S+ SV+ P D +T P P +
Sbjct: 230 TQSEQQTTNVPNSVGSVETTPFPVDSITGPTPCS 263
>07_03_0504 - 18842442-18844668,18845418-18845428
Length = 745
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 356 SLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVP 204
S +++++++ MD+ S +TV K+ FL A H+G +P
Sbjct: 310 SARNLVSLVQMDDDSNVSNMTVTIQNKVHEFLQFEAHEASFLEVHSGDDIP 360
>02_02_0179 +
7500647-7500779,7503021-7503222,7503356-7503427,
7503655-7503726,7504212-7504283,7504711-7504782,
7505045-7505116,7505209-7505280,7505688-7505759,
7506215-7506292,7506670-7506729,7506810-7506848,
7506949-7506998,7507110-7507480,7508467-7508662,
7508856-7508936,7509694-7509848,7510302-7510512,
7510648-7510882,7510995-7511145,7511813-7512181
Length = 944
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 686 GRIPXAVGYQPTLATDM--GTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD 513
G +P +G P L + G E + G+I S++ ++ A+D+T P +TF+ L
Sbjct: 145 GTVPKELGRMPFLKSINLEGNQLEGHIPPEFGNIISLERFFISANDITGELP-STFSRLT 203
Query: 512 ATTVL 498
T L
Sbjct: 204 NMTDL 208
>01_06_1147 + 34892415-34893702,34894051-34894676
Length = 637
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 584 VQAIYVPADDLTDPAPATTFAHLDATTVLS 495
VQ + +PA L P P+ T LDA VLS
Sbjct: 71 VQTLRLPAVGLFGPLPSDTLGKLDALEVLS 100
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = -1
Query: 490 PLLNWVSTQLWI-----LLTQLPVSWTLILLELSTTMLHVEFRKFFRTTN 356
P W+S ++I ++ V+W ++L + ML++ FRK++ +T+
Sbjct: 1079 PFFVWMSVSMYITVIGVVIMTCQVAWPSVVLVVPLLMLNLWFRKYYISTS 1128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,441,097
Number of Sequences: 37544
Number of extensions: 401246
Number of successful extensions: 1167
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -