Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_I05
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...   324   5e-89
AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily a...    59   3e-09
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    58   6e-09
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    53   2e-07
Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U23513-1|ABD94110.1|  294|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z50797-5|CAA90675.1|  342|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score =  324 bits (795), Expect = 5e-89
 Identities = 156/173 (90%), Positives = 164/173 (94%)
 Frame = -3

Query: 686 GRIPXAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 507
           GRIP AVGYQPTLATDMG+MQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT
Sbjct: 332 GRIPSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 391

Query: 506 TVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILG 327
           TVLSR IAEL IYPAVDPLDSTSRIMDPN++G  HY++ARGVQKILQDYKSLQDIIAILG
Sbjct: 392 TVLSRGIAELAIYPAVDPLDSTSRIMDPNVVGQNHYDIARGVQKILQDYKSLQDIIAILG 451

Query: 326 MDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKIL 168
           MDELSEEDKLTV+RARKIQRFLSQPFQVAEVFTGH GK V LEETI+GF+ IL
Sbjct: 452 MDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHQGKFVSLEETIRGFTMIL 504



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = -1

Query: 163 GDYDHLPEVAFYMVGPIEEVVAKADTLAK 77
           G+ DHLPEVAFYM G I++V  KA+ LAK
Sbjct: 506 GELDHLPEVAFYMQGGIDDVFKKAEELAK 534


>AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 300 protein.
          Length = 501

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
 Frame = -3

Query: 680 IPXAVGYQPTLATDMGTMQERITTTK--KGSITSVQAIYVPADDLTDPAPATTFAHLDAT 507
           +P   G+   + TD+ T+ ER    K  +GSIT +  + +P +D+T P P  T    +  
Sbjct: 309 VPGRRGFPGYMYTDLATIYERAGRVKGREGSITQIPILTMPNNDITHPIPDLTGYITEGQ 368

Query: 506 TVLSRAIAELGIYPAVDPLDSTSRIM----DPNIIGAEHYNVARGVQKILQDYKSLQDII 339
             + + + +  IYP +D L S SR+M       +   +H +++  +       K +Q + 
Sbjct: 369 IYIDKQLHKRLIYPPIDVLPSLSRLMKSAVGEGMTREDHSDLSNQLYACYAMGKDVQAMK 428

Query: 338 AILGMDELSEEDKLTVARARKIQR-FLSQ 255
           A++G++ LS +D L +    K ++ F++Q
Sbjct: 429 AVVGVEALSPDDLLYLEFLAKFEKNFIAQ 457


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
 Frame = -3

Query: 680 IPXAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 507
           +P   G+   + TD+ T+ ER      + GSIT +  + +P DD+T P P  T    +  
Sbjct: 297 VPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIPILTMPNDDITHPIPDLTGYITEGQ 356

Query: 506 TVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDII 339
             + R +    IYP ++ L S SR+M   I       +H +V+  +       K +Q + 
Sbjct: 357 IYVDRQLHNRLIYPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQLYACYAIGKDVQAMK 416

Query: 338 AILGMDELSEEDKLTVARARKIQR-FLSQ 255
           A++G + LS +D L +    K ++ F++Q
Sbjct: 417 AVVGEEALSSDDLLYLEFLTKFEKNFITQ 445


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
 Frame = -3

Query: 686 GRIPXAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYVPADDLTDPAPATT 528
           G +P   GY   LA  + +  ER    K       +GS+T V A+  P  D  DP  + T
Sbjct: 355 GEMPADSGYPAYLAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSAT 414

Query: 527 FAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM-------DPNIIGAEHYNVARGVQKIL 369
              +     L + +A+   +P+++ L S S  M       + N    E  ++    ++IL
Sbjct: 415 LGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKNY--PEFVSLRTKCKEIL 472

Query: 368 QDYKSLQDIIAILGMDELSEEDKLTVARARKIQ-RFLSQ 255
           Q+ + L +I+ ++G   L+E DK+T+  A+ I+  FL Q
Sbjct: 473 QEEEDLSEIVQLVGKASLAESDKVTLEVAKIIKDDFLQQ 511


>Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical
           protein ZK896.7 protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = -3

Query: 662 YQPTLATDMG--TMQERITTTKKGSITSVQ-AIYVPADDLTDPAPATTFAHLDATTV 501
           Y PT  T     T+    TTT+  + T+V+      A  +T P P TT +    TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202


>AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical
           protein T06A4.1b protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 26/112 (23%), Positives = 45/112 (40%)
 Frame = -3

Query: 644 TDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 465
           T+  T +E  TTT +   T+      P +  T+P+P T  A   +TT  +   +E     
Sbjct: 482 TEAPTTEEPTTTTTEEPTTTTTT-EEPTEAPTEPSPTTVEATEASTTPEASTSSETSTTE 540

Query: 464 AVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 309
             +P   TS  + P     E   +         DY  L  ++ +   D++S+
Sbjct: 541 NSEPNQKTSTPVAPEASTVEEETITPIKCVDYGDYCRLWGVLQLCYRDQVSK 592


>Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical
           protein W04G5.9 protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 21/77 (27%), Positives = 32/77 (41%)
 Frame = -3

Query: 653 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 474
           T+AT   +     TTTK  + T++    +     T P P TT   +  TT  +R IA   
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230

Query: 473 IYPAVDPLDSTSRIMDP 423
               V P+    + + P
Sbjct: 231 PIKTVPPVKVFGKAIKP 247


>U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical
           protein F25E2.2 protein.
          Length = 624

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 18/60 (30%), Positives = 23/60 (38%)
 Frame = -3

Query: 656 PTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 477
           PT  T   T  +  TTT   +  +      P    T PAP TT      TT+ +   A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478


>U23513-1|ABD94110.1|  294|Caenorhabditis elegans Hypothetical
           protein D2021.4a protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -3

Query: 440 SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 264
           ++I D N+I + HYN V+ G  + L D K ++ +  +   D   E  K+ +A  +   +F
Sbjct: 56  NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114

Query: 263 LSQ-PF 249
           L + PF
Sbjct: 115 LRKIPF 120


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 570 INSL-YRCDGTFLGGGNSFLHSTHVSSQSRLISYS 671
           INSL +   GTFLG G   +   HV S S ++S S
Sbjct: 426 INSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLS 460


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 378 ENSSGLQIPAGHYCYFG 328
           ENS+G +  AGH+C+ G
Sbjct: 424 ENSNGTECSAGHWCHIG 440


>Z50797-5|CAA90675.1|  342|Caenorhabditis elegans Hypothetical
           protein T22H6.4 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 518 LDATTVLSRAIAELGIYPAVDPLDSTSRIMD 426
           +D     ++  A LGIYPA+DP+ +   I D
Sbjct: 275 IDVGVAANKTAAFLGIYPALDPMIAIFLIKD 305


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,753,770
Number of Sequences: 27780
Number of extensions: 339306
Number of successful extensions: 916
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)