Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_H20
(836 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 253 2e-68
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 213 2e-56
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 172 6e-44
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 167 2e-42
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 165 7e-42
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 110 2e-25
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 71 3e-13
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 32 0.12
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 28 1.9
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.3
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 27 4.4
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 27 4.4
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 26 5.8
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 26 5.8
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 7.6
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 26 7.6
SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 7.6
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 26 7.6
SPBC2G5.04c |||COPII-coated vesicle component Erv41 |Schizosacch... 26 7.6
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 253 bits (620), Expect = 2e-68
Identities = 113/257 (43%), Positives = 178/257 (69%), Gaps = 1/257 (0%)
Frame = -1
Query: 836 DQIAFTGSXEVGRIILGAASAVNLKRVTLELGGKSPLVVFNDADVEKXXXXXXXXXXXXX 657
D++AFTGS VGR+++ AA++ NLK+VTLELGGKSP +VFNDAD++
Sbjct: 241 DKVAFTGSTGVGRMVMRAAASSNLKKVTLELGGKSPNIVFNDADLDSAAVWTNYGIFYNS 300
Query: 656 XXXXXAGTRTYVQSGIYDKFVKKAAEIAEKRSVGNPF-EDVQQGPQIDEEMYKKVLNYIV 480
AG+R YVQ +YD+F+K+ A+ VG+PF ED QG Q+ ++ Y+++++YI
Sbjct: 301 GQVCCAGSRVYVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQGAQVSKQQYERIVSYIE 360
Query: 479 AGKEGGARCVAGGDKVGDKGYYIKPTVFADVQDDMKIAREEIFGPVQSILKFETFDEVVD 300
+G GA+ GG + G+ GY+++PT+ ++V +DM + +EEIFGPV +++KF+T +E +
Sbjct: 361 SGIAHGAKLEIGGKRHGNLGYFVEPTILSNVTEDMAVGKEEIFGPVLAVIKFKTIEEAIR 420
Query: 299 RANDTNYGLAAGIITNDITVAMSFSKHVRAGSIWINTYEHVTTQTPFGGFKDSGLGRELG 120
R N++ YGLAAG+ TN+IT A+ S + AG++W+N Y + Q PFGG+K+SG+GRELG
Sbjct: 421 RGNNSTYGLAAGVHTNNITNAIKVSNALEAGTVWVNCYNLLHHQIPFGGYKESGIGRELG 480
Query: 119 EDGISQYLETKTITMHV 69
G++ Y +TK + +++
Sbjct: 481 SYGLTNYTQTKAVHINL 497
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 496
Score = 213 bits (521), Expect = 2e-56
Identities = 111/262 (42%), Positives = 161/262 (61%), Gaps = 3/262 (1%)
Frame = -1
Query: 836 DQIAFTGSXEVGRIILGAASAVNLKRVTLELGGKSPLVVFNDADVEKXXXXXXXXXXXXX 657
D+IAFTGS +VG +I+ +A NLK VTLE GGKSP +VF DAD+++
Sbjct: 235 DKIAFTGSTKVG-VIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNS 293
Query: 656 XXXXXAGTRTYVQSGIYDKFVKKAAE-IAEKRSVGNPFED-VQQGPQIDEEMYKKVLNYI 483
+ +R YVQ +YDKF++ + + + VG PF+D GP +++ Y ++ NYI
Sbjct: 294 GQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYI 353
Query: 482 VAGKEGGARCVAGGDKVGDK-GYYIKPTVFADVQDDMKIAREEIFGPVQSILKFETFDEV 306
GK+ GA+ V G + + K GY+I PT+FAD ++M I +EEIFGPV +I KF+T DE
Sbjct: 354 EQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEA 413
Query: 305 VDRANDTNYGLAAGIITNDITVAMSFSKHVRAGSIWINTYEHVTTQTPFGGFKDSGLGRE 126
+++AN+T YGLAA T D+ A S + AG ++IN+ E+ Q PFGG K SG+G E
Sbjct: 414 IEKANNTTYGLAAMCFTKDLERAHRVSDELEAGMVFINSTENSDIQAPFGGIKMSGIGNE 473
Query: 125 LGEDGISQYLETKTITMHVPKK 60
LG +GI Y + K + ++ K
Sbjct: 474 LGSNGIEMYTQIKAVHINFNNK 495
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 500
Score = 172 bits (418), Expect = 6e-44
Identities = 95/256 (37%), Positives = 142/256 (55%), Gaps = 2/256 (0%)
Frame = -1
Query: 830 IAFTGSXEVGRIILGAASAVNLKRVTLELGGKSPLVVFNDADVEKXXXXXXXXXXXXXXX 651
+AFTGS G+ I+ AA A N+ +TLELGGKSPL++ DAD+
Sbjct: 245 LAFTGSLATGKKIMHAA-AENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIFFNQGE 303
Query: 650 XXXAGTRTYVQSGIYDKFVKKAAEIAEKRSVGNPFE-DVQQGPQIDEEMYKKVLNYIVAG 474
A +R V + D+ + A K +GN + V GP + + ++K+++YI +
Sbjct: 304 ACTAASRLIVHESVADEVLGGLVSEANKLIIGNGLDPQVTLGPVVSKTQFEKIVSYIQSA 363
Query: 473 KEGGARCVAGG-DKVGDKGYYIKPTVFADVQDDMKIAREEIFGPVQSILKFETFDEVVDR 297
G +CV GG + KGY+I PTVF +VQ KI REEIFGPV ++ F T +E ++
Sbjct: 364 INEGCKCVVGGLPRSEQKGYFIPPTVFTNVQTHNKIWREEIFGPVLAVKTFHTNEEALEL 423
Query: 296 ANDTNYGLAAGIITNDITVAMSFSKHVRAGSIWINTYEHVTTQTPFGGFKDSGLGRELGE 117
AND+ YGL +G+ + + FS ++ AG +N Y VT + P+ G+K SGLG L +
Sbjct: 424 ANDSEYGLGSGVFSTNPKTLEFFSNNIEAGMCSLNNYHVVTHELPWIGWKHSGLGVGLSK 483
Query: 116 DGISQYLETKTITMHV 69
G ++Y+ K IT +V
Sbjct: 484 HGYNEYMRLKQITQYV 499
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 167 bits (405), Expect = 2e-42
Identities = 86/255 (33%), Positives = 138/255 (54%), Gaps = 2/255 (0%)
Frame = -1
Query: 833 QIAFTGSXEVGRIILGAASAVNLKRVTLELGGKSPLVVFNDADVEKXXXXXXXXXXXXXX 654
+++FTGS VG+I++G SA +K+V++ELGG +P +VF D +++
Sbjct: 237 KVSFTGSTNVGKILMGQ-SASTIKKVSMELGGNAPFIVFPDFPIDQAVESFCTIKFNSCG 295
Query: 653 XXXXAGTRTYVQSGIYDKFVKKAAEIAEKRSVGNPFEDVQQ-GPQIDEEMYKKVLNYIVA 477
R YV +YD+FV K E + VG+ F+ GP I ++ KKV +I
Sbjct: 296 QVCVCPNRVYVHKNVYDEFVSKLTEKVKTIKVGDGFDSSSAVGPLISQDGCKKVSKHIED 355
Query: 476 GKEGGARCVAGGDKVGD-KGYYIKPTVFADVQDDMKIAREEIFGPVQSILKFETFDEVVD 300
GA+ GG ++ KGY+ +PTV + V DM +A EE FGP+ S+ KF+ +EV++
Sbjct: 356 AVSKGAKITVGGKEISSSKGYFFEPTVLSGVTQDMLVASEETFGPLASVFKFDDTEEVIE 415
Query: 299 RANDTNYGLAAGIITNDITVAMSFSKHVRAGSIWINTYEHVTTQTPFGGFKDSGLGRELG 120
AND++ GLA + TN+++ + +K + G + N FGG K SG G+E G
Sbjct: 416 WANDSDVGLAGYVFTNNLSTMIHVAKELEVGLVGANIEMVDEPFISFGGIKQSGFGKEAG 475
Query: 119 EDGISQYLETKTITM 75
G+ +++ K I +
Sbjct: 476 RLGVQEFMVVKEINL 490
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 165 bits (401), Expect = 7e-42
Identities = 94/255 (36%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
Frame = -1
Query: 833 QIAFTGSXEVGRIILGAASAVNLKRVTLELGGKSPLVVFNDADVEKXXXXXXXXXXXXXX 654
+++FTGS VG+I L S+ LK+++LELGG +P +VF DAD+EK
Sbjct: 242 KVSFTGSTNVGKI-LAKQSSSTLKKLSLELGGNAPFIVFEDADLEKAADALMACKFRGSG 300
Query: 653 XXXXAGTRTYVQSGIYDKFVKKAAEIAEKRSVGNPFE-DVQQGPQIDEEMYKKVLNYIVA 477
R YV S +YD FV E K +G + V GP I E+ KV ++
Sbjct: 301 QTCVCANRIYVHSSVYDAFVDLVTERVSKFKLGYGLDAGVTHGPLISEKAISKVKQHVED 360
Query: 476 GKEGGARCVAGGDKVGDKG-YYIKPTVFADVQDDMKIAREEIFGPVQSILKFETFDEVVD 300
+ G V GG + G Y +PTV + + M I+ EE FGPV ++ KF+T DEVV
Sbjct: 361 AVQKGGVVVTGGKVASNLGPMYFEPTVIINAKQGMLISEEETFGPVGALFKFDTEDEVVA 420
Query: 299 RANDTNYGLAAGIITNDITVAMSFSKHVRAGSIWINTYEHVTTQTPFGGFKDSGLGRELG 120
AND+ GLA + + DI+ + ++ G + NT +PFGG K+SG GRE
Sbjct: 421 WANDSPVGLAGYLFSKDISRVFRVGEALQVGMVGCNTGLVSDVLSPFGGVKESGFGREGS 480
Query: 119 EDGISQYLETKTITM 75
+ GIS+YL+ K++T+
Sbjct: 481 KYGISEYLDIKSLTI 495
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 110 bits (265), Expect = 2e-25
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 6/256 (2%)
Frame = -1
Query: 830 IAFTGSXEVGRIILGAASAVNLKRVTLELGGKSPLVVFNDADVEKXXXXXXXXXXXXXXX 651
I F GS + +++ A++A L + LELGGK P ++ +D +E+
Sbjct: 213 ITFIGSQPIAKLV-AASAAKQLTPLCLELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQ 271
Query: 650 XXXAGTRTYVQSGIYDKFVKKAAEIAEKRSVGNPFE-DVQQGPQIDEEMYKKVLNYIVAG 474
R G+YD + K +G + DV G + + + + I
Sbjct: 272 NCIGIERIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMVSNNRFDHLESLIQDA 331
Query: 473 KEGGARCVAGGDKVGD----KGYYIKPTVFADVQDDMKIAREEIFGPVQSILKFETFDEV 306
GAR V GG + KG Y PT+ D ++MKIA+EE F P+ + + ++ +
Sbjct: 332 VSKGARLVYGGHRFQHPKYPKGNYFLPTLLVDATNEMKIAQEECFAPIALVFRAKSPEHA 391
Query: 305 VDRANDTNYGLAAGIITNDITVAMSFSKHVRAGSIWINTY-EHVTTQTPFGGFKDSGLGR 129
++ AN T +GL A + D + F+ ++ G + +N + Q PFGG K SG GR
Sbjct: 392 LEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAFYLLQMPFGGCKKSGYGR 451
Query: 128 ELGEDGISQYLETKTI 81
G +G+ +K I
Sbjct: 452 FAGYEGLRGICNSKAI 467
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 70.5 bits (165), Expect = 3e-13
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 19/267 (7%)
Frame = -1
Query: 824 FTGSXEVGRIILGAA--SAVNLK-----RVTLELGGKSPLVVFNDADVEKXXXXXXXXXX 666
FTGS V R + G + N K ++ E GGK+ +V + A+++
Sbjct: 266 FTGSTAVFRSLWGTIGENVANGKYRTYPKIVGETGGKNFHLVHSSAEIKSAVVNAVRAAF 325
Query: 665 XXXXXXXXAGTRTYVQSGIYDK-FVKKAAEIAEKRSVGNPFEDVQQ--GPQIDEEMYKKV 495
A +R YV ++ F + + + VG P D GP I + + K+
Sbjct: 326 EYQGQKCSALSRLYVSKYAWENGFRDELTKQVKSLKVGAPLTDFANFVGPVIHQASFNKL 385
Query: 494 LNYIV-AGKEGGARCVAGGDKVGDKGYYIKPTVFADVQDDMKIAREEIFGPVQSILKFE- 321
+ A + +AGG +G++++PTV I E+FGPV S+ +E
Sbjct: 386 KKVLESAASDSEIEVLAGGKADDSEGFFVEPTVLLSKNPKHDIFVNELFGPVLSVYVYED 445
Query: 320 -TFDEVVDRANDTN-YGLAAGIITNDITVAMSFSKHVR--AGSIWIN--TYEHVTTQTPF 159
D V D + T YGL I D V + +R AG+ +IN V + PF
Sbjct: 446 DNLDAVCDLIDTTTPYGLTGSIFAQDRVVVRKLTDRLRNAAGNFYINDKCTGAVVGEQPF 505
Query: 158 GGFKDSGLGRELGEDGI-SQYLETKTI 81
GG + SG + G I S+++ ++I
Sbjct: 506 GGARASGTNDKAGSGMILSRFVSPRSI 532
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 31.9 bits (69), Expect = 0.12
Identities = 29/89 (32%), Positives = 42/89 (47%)
Frame = +3
Query: 408 FDVVTFISDFVSTCDAPGATFLTSYDVVEHFLVHFFIDLWSLLNVLEGISDGSLFCDLGS 587
FDV + S F++ D PGATFL + D +++W+ L+ ++ S GS+ L
Sbjct: 1707 FDVSVY-SLFLNQNDYPGATFLPTADDQ--------VEIWNKLSYIDCFSIGSIPSRLAK 1757
Query: 588 FLDKLVIDTGLDVRSGSGAATLTGVCESR 674
F+ TG VR LT V E R
Sbjct: 1758 FVGNTAF-TGFGVREAI-PLLLTAVNEGR 1784
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 652 SVAAPEPERTSNPVSMTSLSRKLPRSQKRDPSEIPSRTFNKDH 524
+ + P P + NP+S TS+S ++P K + +P N ++
Sbjct: 186 NTSKPNPIVSENPISATSVSIEIPIKPKELSNNLPFPRLNNNN 228
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 306 HLIERFELENALNGAEDLFSGNFHVILN-ISEDSRFDVVTFISDFVSTCDAPGATFLTSY 482
H +++F +E A D+ H LN + E+++ V+ I D+V D + +
Sbjct: 526 HCLKQFSVEVKTPDAVDVA----HKALNTLDEETKHQVLEEIGDYVKELDEESKKAIENK 581
Query: 483 DVVEHFLVHFF 515
D +L+H +
Sbjct: 582 DSTSEWLLHLY 592
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = -2
Query: 736 KVRW*FSMMLTLKKQHKSLTQRLSQTPVSVAAPEPERTSNPVSMTSLSRKLPRSQKRDPS 557
K +W + ++ H+S + S P S+A P P S + + +P + +
Sbjct: 439 KTKWSTTRRDKGREMHRSQVIQTSGRPKSMAPPSPSPISPSFPLHEIQSPMPNRRMAASA 498
Query: 556 EIPSRTFNKDHRSMKKC 506
+ S+T N KC
Sbjct: 499 DDISQTSNFTTEIKGKC 515
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.6 bits (56), Expect = 4.4
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = -1
Query: 596 VKKAAEIAEKRSVGNPFEDVQQ--GPQIDEEMY-KKVLNYIVAGKEGGARCVAGGDKVGD 426
+KKAAE AE +V D+Q ++ ++MY K+ +N + G + GG+ +
Sbjct: 202 LKKAAEAAEPATVTEDATDLQNEVDQELLKDMYGKEHVNIVFIGHVDAGKSTLGGNILFL 261
Query: 425 KGYYIKPTVFADVQDDMKIAREE 357
G K T+ ++ + K A +E
Sbjct: 262 TGMVDKRTM-EKIEREAKEAGKE 283
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -1
Query: 200 WINTYEHVTTQTPFGGFKDSGLGRELGEDGISQYLETKTITMHVPKK 60
W+ E + FGG+K S L R+LG + L + V +K
Sbjct: 269 WLRDAETAVVEEWFGGYKVSKLMRQLGAGSLLNDLSMRMENFVVAEK 315
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 26.2 bits (55), Expect = 5.8
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = -1
Query: 311 EVVDRANDTNYGLAAGIITNDITVAMSFSKHVRAGSIWINTYEHVTTQTPFGGFKDSGLG 132
+++ + G +GI + A + + + S W++ TQ P+ D
Sbjct: 732 QLLKNISSNKLGSISGITKHKKKAARKYVSELLSNS-WLSNLSE--TQVPY----DPKFA 784
Query: 131 RELGEDGISQYLETKTITMHVPKKPEF 51
+++GE I Y++T +PK +F
Sbjct: 785 KQVGEGMIDSYIQTTDAVSKLPKFVKF 811
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 7.6
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 201 DRSSANVLRETHGYGDVVSDDTSSQAVICVISAIHHLIERFELENALNG-AEDLFSGNFH 377
D A V T YG S + + +HHLI + E+ LNG + S N
Sbjct: 264 DTERALVGSLTDSYGFKKSGLIKKTISLMIDGRLHHLISYYTPEDVLNGKLQTPSSFNLF 323
Query: 378 VILNISED 401
L IS+D
Sbjct: 324 QQLTISKD 331
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 25.8 bits (54), Expect = 7.6
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -1
Query: 521 IDEEMYKKVLNYIVAGK--EGGARCVAGGDKVGDKGYYIKPTVFADV--QDDMKIAREEI 354
+DEE Y +VLN + + E G + G VGD Y ++ F DV + ++ I EE+
Sbjct: 147 LDEEHYNEVLNAMTEKRIGEAGVAVIVQG-AVGDYFYIVEQGEF-DVYKRPELNITPEEV 204
>SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 7.6
Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Frame = +3
Query: 159 ERSLSRNMFVSVDPDRSSANVLRETHGYGDVVSDDTSSQAVICVISAIHHLIERFELENA 338
E + RN+F S+DP+ + H G + + ++ V++ ++ +F ++
Sbjct: 299 ENAFDRNIFYSIDPNEGLPTIAEFFHSVGAAFT--LKADSIAGVVAQMNDTTTQFHIQAN 356
Query: 339 LNGAEDLFSGNFHVILNISEDSRFDVVTFISDFV--STCDAPGATFLTSYDVVEHFLVHF 512
+ + G + + D+ + S +V S+ + L YD +FL+
Sbjct: 357 EAYRKAINPGRLVIYPDAGIDTYSPFIYLDSSYVPFSSGSSLSHVALHHYDCEPNFLMRA 416
Query: 513 F 515
F
Sbjct: 417 F 417
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 587 AAEIAEKRSVGNPFEDVQQGPQI 519
A E+A++R++ PFED Q G I
Sbjct: 267 AYEVAKRRNIIIPFEDAQTGYSI 289
>SPBC2G5.04c |||COPII-coated vesicle component Erv41
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 333
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 69 YVHSNC--FSFQILANSIFTQFSAKARIFESTERSLSRNMFV 188
Y H+N F+FQ + + T + + R FE+ + SL+ N V
Sbjct: 212 YGHANDHPFAFQYYLSVLPTSYKSSFRSFETNQYSLTENSVV 253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,223,122
Number of Sequences: 5004
Number of extensions: 67205
Number of successful extensions: 277
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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