Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_H07
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    37   5e-04
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    37   7e-04
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    31   0.046
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    31   0.046
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    28   0.24 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    27   0.75 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   9.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
 Frame = -2

Query: 429 FRCQLCPKGFKHPTSLTLHKDAH-AGKT---QCPVCHRSFSRSYDMRSHLQRIHQGKQLT 262
           + C +C   F    SL  HK  H  G     QC +C  +  R  D+R H+Q +H   +  
Sbjct: 268 YSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADK-- 325

Query: 261 IKIRYKNGDNVAPKQFT 211
             I+ K  D+  P +++
Sbjct: 326 -PIKCKRCDSTFPDRYS 341



 Score = 34.7 bits (76), Expect = 0.003
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -2

Query: 426 RCQLCPKGFKHPTSLTLHKDAHAGKT--QCPVCHRSFSRSYDMRSHLQRIH 280
           +C +C +GFK   SL  H + H G    +C  C   F+ S ++  H++  H
Sbjct: 156 KCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRH 206


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 36.7 bits (81), Expect = 7e-04
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -2

Query: 426 RCQLCPKGFKHPTSLTLHKDAH-AGKTQCPVCHRSFSRSYDMRSHLQRIH 280
           RC+LC K   H   +  H   H  G+ +CP+C  +++RS ++R+H +  H
Sbjct: 501 RCKLCGKVVTH---IRNHYHVHFPGRFECPLCRATYTRSDNLRTHCKFKH 547


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 30.7 bits (66), Expect = 0.046
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 429 FRCQLCPKGFKHPTSLTLHKDAHAG-KTQCPVCHRSFSRSYDMRSHLQRIH 280
           +RC+ C K     T+   H  +H   ++ CP C  S+SR   +RSHL+  H
Sbjct: 527 WRCRSCGK---EVTNRWHHFHSHTPQRSLCPYCPASYSRIDTLRSHLRIKH 574


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 30.7 bits (66), Expect = 0.046
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 429 FRCQLCPKGFKHPTSLTLHKDAHAG-KTQCPVCHRSFSRSYDMRSHLQRIH 280
           +RC+ C K     T+   H  +H   ++ CP C  S+SR   +RSHL+  H
Sbjct: 503 WRCRSCGK---EVTNRWHHFHSHTPQRSLCPYCPASYSRIDTLRSHLRIKH 550


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 375  HKDAHAGKT-QCPVCHRSFSRSYDMRSHLQRIH 280
            H + H  ++ +CPVC + F+R  +M++H +  H
Sbjct: 914  HANIHRPQSHECPVCGQKFTRRDNMKAHCKVKH 946


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
            protein.
          Length = 973

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = -2

Query: 378  LHKDAHAGKTQCPVCHRSFSRSYDMRSHLQRIHQGK-QLTIKIRYK-NGDNVAPKQFTN 208
            LHK  HA    CP C      +  +  H  R  + + ++T+K     NG N+      N
Sbjct: 897  LHKYRHASSPDCPACVSIVESTEHVLFHCPRFAEERHEITVKCGTTINGTNLTELMLKN 955


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
 Frame = -2

Query: 660 SNRDENIPQVC-PVNNVSEQENGNDEASQDISRPDDSINTKVKSVLPPSEEMQVDPQTST 484
           SNR     +VC P N   E+ +    A  D+S    +  T   +    +        T+T
Sbjct: 108 SNRCPAYEEVCCPKNAFPEEFHATQVAKHDLSMGATTSTTSTTATTTTTTTTTTTTTTTT 167

Query: 483 AAPEDLSDKN 454
             P  + + +
Sbjct: 168 TTPNPVGESD 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,616
Number of Sequences: 2352
Number of extensions: 14363
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)