Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_H05
         (462 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075579-1|AAL68384.1|  834|Drosophila melanogaster SD06318p pro...    28   7.0  
AM262814-1|CAK18654.1|  834|Drosophila melanogaster PP1 interact...    28   7.0  
AE013599-504|AAM68862.1|  834|Drosophila melanogaster CG1553-PC,...    28   7.0  
AE013599-503|AAM68861.1|  834|Drosophila melanogaster CG1553-PB,...    28   7.0  
AE013599-502|AAF59190.1|  834|Drosophila melanogaster CG1553-PA,...    28   7.0  

>AY075579-1|AAL68384.1|  834|Drosophila melanogaster SD06318p
           protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 217 PVPSRQSVQYLD----PFTIPERNVPRSVFQHIKCHDLRDYWDPIN 342
           P P +Q  + L     P  +PE  VPR   +H    DL +Y D ++
Sbjct: 232 PAPGKQEPRVLPMKTKPSPVPEFTVPRYTIKHSHDVDLSEYTDELD 277


>AM262814-1|CAK18654.1|  834|Drosophila melanogaster PP1 interacting
           20 protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 217 PVPSRQSVQYLD----PFTIPERNVPRSVFQHIKCHDLRDYWDPIN 342
           P P +Q  + L     P  +PE  VPR   +H    DL +Y D ++
Sbjct: 232 PAPGKQEPRVLPMKTKPSPVPEFTVPRYTIKHSHDVDLSEYTDELD 277


>AE013599-504|AAM68862.1|  834|Drosophila melanogaster CG1553-PC,
           isoform C protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 217 PVPSRQSVQYLD----PFTIPERNVPRSVFQHIKCHDLRDYWDPIN 342
           P P +Q  + L     P  +PE  VPR   +H    DL +Y D ++
Sbjct: 232 PAPGKQEPRVLPMKTKPSPVPEFTVPRYTIKHSHDVDLSEYTDELD 277


>AE013599-503|AAM68861.1|  834|Drosophila melanogaster CG1553-PB,
           isoform B protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 217 PVPSRQSVQYLD----PFTIPERNVPRSVFQHIKCHDLRDYWDPIN 342
           P P +Q  + L     P  +PE  VPR   +H    DL +Y D ++
Sbjct: 232 PAPGKQEPRVLPMKTKPSPVPEFTVPRYTIKHSHDVDLSEYTDELD 277


>AE013599-502|AAF59190.1|  834|Drosophila melanogaster CG1553-PA,
           isoform A protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 217 PVPSRQSVQYLD----PFTIPERNVPRSVFQHIKCHDLRDYWDPIN 342
           P P +Q  + L     P  +PE  VPR   +H    DL +Y D ++
Sbjct: 232 PAPGKQEPRVLPMKTKPSPVPEFTVPRYTIKHSHDVDLSEYTDELD 277


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,340,679
Number of Sequences: 53049
Number of extensions: 325873
Number of successful extensions: 1096
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)