Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_H04
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109258-1|AAI09259.1|  560|Homo sapiens ATH1, acid trehalase-li...    58   3e-08
BC109257-1|AAI09258.1|  560|Homo sapiens ATH1, acid trehalase-li...    58   3e-08
AK090428-1|BAC03409.1|  339|Homo sapiens FLJ00345 protein protein.     58   3e-08
AL589685-5|CAI14163.1|  175|Homo sapiens novel protein protein.        31   3.9  
AL589685-3|CAI14161.1|  132|Homo sapiens novel protein protein.        31   3.9  

>BC109258-1|AAI09259.1|  560|Homo sapiens ATH1, acid trehalase-like
           1 (yeast) protein.
          Length = 560

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
 Frame = -3

Query: 692 VWSELQSPQVGAVNFFTGMGGFLQTLIFGYAGIRIHLDRIEIT-RPQLPPETKEFKIKGI 516
           VW+E  +   GAVNF TGMGGFLQ ++FG  G R+   R  +T  P          + GI
Sbjct: 394 VWTE-NADGSGAVNFLTGMGGFLQAVVFGCTGFRV--TRAGVTFDPVCLSGISRVSVSGI 450

Query: 515 KYLGSSLSMHIQATSVTLTVSSVHDQWPLVMN----DGRYNVTLTPGMTVTLPK 366
            Y G+ L+      SVT+ V++    W   +       +  ++L PG  V+ P+
Sbjct: 451 FYQGNKLNFSFSEDSVTVEVTARAGPWAPHLEAELWPSQSRLSLLPGHKVSFPR 504


>BC109257-1|AAI09258.1|  560|Homo sapiens ATH1, acid trehalase-like
           1 (yeast) protein.
          Length = 560

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
 Frame = -3

Query: 692 VWSELQSPQVGAVNFFTGMGGFLQTLIFGYAGIRIHLDRIEIT-RPQLPPETKEFKIKGI 516
           VW+E  +   GAVNF TGMGGFLQ ++FG  G R+   R  +T  P          + GI
Sbjct: 394 VWTE-NADGSGAVNFLTGMGGFLQAVVFGCTGFRV--TRAGVTFDPVCLSGISRVSVSGI 450

Query: 515 KYLGSSLSMHIQATSVTLTVSSVHDQWPLVMN----DGRYNVTLTPGMTVTLPK 366
            Y G+ L+      SVT+ V++    W   +       +  ++L PG  V+ P+
Sbjct: 451 FYQGNKLNFSFSEDSVTVEVTARAGPWAPHLEAELWPSQSRLSLLPGHKVSFPR 504


>AK090428-1|BAC03409.1|  339|Homo sapiens FLJ00345 protein protein.
          Length = 339

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
 Frame = -3

Query: 692 VWSELQSPQVGAVNFFTGMGGFLQTLIFGYAGIRIHLDRIEIT-RPQLPPETKEFKIKGI 516
           VW+E  +   GAVNF TGMGGFLQ ++FG  G R+   R  +T  P          + GI
Sbjct: 173 VWTE-NADGSGAVNFLTGMGGFLQAVVFGCTGFRV--TRAGVTFDPVCLSGISRVSVSGI 229

Query: 515 KYLGSSLSMHIQATSVTLTVSSVHDQWPLVMN----DGRYNVTLTPGMTVTLPK 366
            Y G+ L+      SVT+ V++    W   +       +  ++L PG  V+ P+
Sbjct: 230 FYQGNKLNFSFSEDSVTVEVTARAGPWAPHLEAELWPSQSRLSLLPGHKVSFPR 283


>AL589685-5|CAI14163.1|  175|Homo sapiens novel protein protein.
          Length = 175

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 410 YNVTLTPGMTVTLPKDGI-STIRAVPWKDCKLPADII 303
           Y++ L PG    LP  G   T  +  W  C+LPAD++
Sbjct: 53  YSLLLQPGRAFHLPAPGYPQTAPSAHWSLCRLPADLL 89


>AL589685-3|CAI14161.1|  132|Homo sapiens novel protein protein.
          Length = 132

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 410 YNVTLTPGMTVTLPKDGI-STIRAVPWKDCKLPADII 303
           Y++ L PG    LP  G   T  +  W  C+LPAD++
Sbjct: 53  YSLLLQPGRAFHLPAPGYPQTAPSAHWSLCRLPADLL 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,465,386
Number of Sequences: 237096
Number of extensions: 2101515
Number of successful extensions: 4227
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4227
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)