Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_H04
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 31 0.59
Z71261-7|CAI70415.1| 570|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z71261-6|CAA95803.3| 578|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical... 29 4.2
AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical ... 29 4.2
AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical ... 29 4.2
AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical ... 29 4.2
AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induc... 29 4.2
Z81576-8|CAB76724.1| 440|Caenorhabditis elegans Hypothetical pr... 28 7.3
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 28 7.3
U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer ... 28 7.3
AL023837-4|CAB76749.1| 440|Caenorhabditis elegans Hypothetical ... 28 7.3
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 28 7.3
AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ... 28 7.3
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.59
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = -3
Query: 620 TLIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYLGSSLSMHIQATSVTLTVSSVHD 441
+++ GY G IH R+ T P +P K G+ G+S ++ + T D
Sbjct: 268 SVVKGYCGHGIH--RLFHTAPNVPHYAKN-NATGVMKAGNSFTIEPMINAGTYHDDKWPD 324
Query: 440 QWPLVMNDGRYNVTLTPGMTVT 375
W V DGR + + VT
Sbjct: 325 DWTAVTRDGRRSAQFEQTLLVT 346
>Z71261-7|CAI70415.1| 570|Caenorhabditis elegans Hypothetical
protein F21C3.4b protein.
Length = 570
Score = 29.5 bits (63), Expect = 2.4
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = -3
Query: 677 QSPQVGAVNFFTGMGGFLQT---LIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYL 507
+SPQ+G V FF + ++T LIF I + + T P + FK ++
Sbjct: 398 RSPQLGDVAFFDILPRRIETKDRLIFKIPYTHIAVKKKPDT-PDSLLKIDCFK-NSVRCF 455
Query: 506 GSSLSMHIQA--TSVTLTVSSVHDQWPLVMNDGRYNVTLTPGMTVTLPKD 363
G L M ++ + L V HD + + Y + T G+ VT+PK+
Sbjct: 456 GGVLEMKVKIALSKPELVVEQYHDNTEMNSDHHFYYLKATNGVLVTIPKE 505
>Z71261-6|CAA95803.3| 578|Caenorhabditis elegans Hypothetical
protein F21C3.4a protein.
Length = 578
Score = 29.5 bits (63), Expect = 2.4
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = -3
Query: 677 QSPQVGAVNFFTGMGGFLQT---LIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYL 507
+SPQ+G V FF + ++T LIF I + + T P + FK ++
Sbjct: 406 RSPQLGDVAFFDILPRRIETKDRLIFKIPYTHIAVKKKPDT-PDSLLKIDCFK-NSVRCF 463
Query: 506 GSSLSMHIQA--TSVTLTVSSVHDQWPLVMNDGRYNVTLTPGMTVTLPKD 363
G L M ++ + L V HD + + Y + T G+ VT+PK+
Sbjct: 464 GGVLEMKVKIALSKPELVVEQYHDNTEMNSDHHFYYLKATNGVLVTIPKE 513
>Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 672 PPGRRCEFLHWDGRVPADIDLRXRRNQNPFGQDRDYKAATAARNER 535
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 667 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 707
>Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 672 PPGRRCEFLHWDGRVPADIDLRXRRNQNPFGQDRDYKAATAARNER 535
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 773 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 813
>Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 672 PPGRRCEFLHWDGRVPADIDLRXRRNQNPFGQDRDYKAATAARNER 535
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 771 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 811
>AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 672 PPGRRCEFLHWDGRVPADIDLRXRRNQNPFGQDRDYKAATAARNER 535
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 667 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 707
>AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 672 PPGRRCEFLHWDGRVPADIDLRXRRNQNPFGQDRDYKAATAARNER 535
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 773 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 813
>AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 672 PPGRRCEFLHWDGRVPADIDLRXRRNQNPFGQDRDYKAATAARNER 535
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 771 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 811
>AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical
protein F38A6.3c protein.
Length = 503
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 672 PPGRRCEFLHWDGRVPADIDLRXRRNQNPFGQDRDYKAATAARNER 535
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 451 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 491
>AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induced
factor 1 protein.
Length = 719
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 672 PPGRRCEFLHWDGRVPADIDLRXRRNQNPFGQDRDYKAATAARNER 535
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 667 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 707
>Z81576-8|CAB76724.1| 440|Caenorhabditis elegans Hypothetical
protein Y37H2C.3 protein.
Length = 440
Score = 27.9 bits (59), Expect = 7.3
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 4/156 (2%)
Frame = +1
Query: 142 SNQKETFVIRLSSILRIPYKKWDTKT*TSNIKSWYILHKANLLYDPIGLR*FCPIISAGS 321
SN ++ LSSIL+ P+ DT T ++W +L A PI L P++ S
Sbjct: 215 SNNLSLAIMTLSSILKSPFFTLDTLVITETQQAWGVLF-AGSESIPIELAKVSPLL-VTS 272
Query: 322 LQSFH-GTARIVEIPSLGSVTVIPGVSVTLYLP-SFMTNGHWSCTDDTVSVTLVAWICID 495
LQ IV I L + VS+ P F+ V L W ++
Sbjct: 273 LQFIDIRCEEIVSIVRLTKSGTLKEVSIRFTKPYQFVLRSRPDTVPLQNIVELEQWKHLE 332
Query: 496 RLD--PKYLIPFILNSFVSGGSCGLVISILSKWILI 597
+ D + ++SF+ SC + + IL+ LI
Sbjct: 333 KFDVIGDIFMNIPIDSFLHLTSCIVRLVILTTEELI 368
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 501 ESVDAYPGDQRHADGVVGARPVAVSHERREIQRDAHSWY 385
ES + GD+ + DGV+ A R EI R + WY
Sbjct: 163 ESFVLFTGDRLNGDGVILAMRQKWKDMRHEISRFMNKWY 201
>U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform a protein.
Length = 572
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 501 ESVDAYPGDQRHADGVVGARPVAVSHERREIQRDAHSWY 385
ES + GD+ + DGV+ A R EI R + WY
Sbjct: 178 ESFVLFTGDRLNGDGVILAMRQKWKDMRHEISRFMNKWY 216
>AL023837-4|CAB76749.1| 440|Caenorhabditis elegans Hypothetical
protein Y37H2C.3 protein.
Length = 440
Score = 27.9 bits (59), Expect = 7.3
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 4/156 (2%)
Frame = +1
Query: 142 SNQKETFVIRLSSILRIPYKKWDTKT*TSNIKSWYILHKANLLYDPIGLR*FCPIISAGS 321
SN ++ LSSIL+ P+ DT T ++W +L A PI L P++ S
Sbjct: 215 SNNLSLAIMTLSSILKSPFFTLDTLVITETQQAWGVLF-AGSESIPIELAKVSPLL-VTS 272
Query: 322 LQSFH-GTARIVEIPSLGSVTVIPGVSVTLYLP-SFMTNGHWSCTDDTVSVTLVAWICID 495
LQ IV I L + VS+ P F+ V L W ++
Sbjct: 273 LQFIDIRCEEIVSIVRLTKSGTLKEVSIRFTKPYQFVLRSRPDTVPLQNIVELEQWKHLE 332
Query: 496 RLD--PKYLIPFILNSFVSGGSCGLVISILSKWILI 597
+ D + ++SF+ SC + + IL+ LI
Sbjct: 333 KFDVIGDIFMNIPIDSFLHLTSCIVRLVILTTEELI 368
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 501 ESVDAYPGDQRHADGVVGARPVAVSHERREIQRDAHSWY 385
ES + GD+ + DGV+ A R EI R + WY
Sbjct: 163 ESFVLFTGDRLNGDGVILAMRQKWKDMRHEISRFMNKWY 201
>AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical
protein Y18H1A.3 protein.
Length = 1258
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 101 VNPLIHFRKLVSDYQTRKKRSLFDYHQFYEFH 196
V+ + H + L+ T +KR L D H F FH
Sbjct: 26 VSRVKHLKILLDTLTTNEKRQLLDEHSFETFH 57
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 507 RIESVDAYPGDQRHADGVVGARPVAV 430
R+ D YPGD HA+ V G +P+ +
Sbjct: 223 RVILKDGYPGDYVHANYVKGTKPMFI 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,737,943
Number of Sequences: 27780
Number of extensions: 333038
Number of successful extensions: 1013
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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