Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_H02
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q553R3 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q553A3 Cluster: Putative uncharacterized protein; n=2; ...    34   3.2  
UniRef50_Q47UH4 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_Q9VA32 Cluster: CG12045-PA; n=3; Diptera|Rep: CG12045-P...    33   5.6  
UniRef50_A2FIU7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_O96134 Cluster: Protein kinase, putative; n=4; Plasmodi...    33   7.4  
UniRef50_Q3W047 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  
UniRef50_Q5XDZ7 Cluster: DNA repair protein radA homolog; n=54; ...    33   9.7  

>UniRef50_Q553R3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1377

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 25/81 (30%), Positives = 38/81 (46%)
 Frame = -2

Query: 724 QPPSCEESVCSEPMELDRFPNMSFFSKTQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPP 545
           QP S + S  S P  +   PN       Q Q   R  S + P +Q+N+   IP+T   PP
Sbjct: 109 QPLSPQSSSPSSPQHVVIQPNQP---NQQQQNANRKQSALKPSVQHNTIPNIPRTHSAPP 165

Query: 544 TNSQNSFIHRPQSHVHVFKTP 482
           +  +    H+ Q+++  F TP
Sbjct: 166 SLEEQQQQHQHQNNIKGF-TP 185


>UniRef50_Q553A3 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 1290

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 20/81 (24%), Positives = 31/81 (38%)
 Frame = -2

Query: 739 RNXFSQPPSCEESVCSEPMELDRFPNMSFFSKTQPQFFPRMNSPIFPQMQYNSHVQIPQT 560
           R+   Q    ++    EP E++     +    TQP  +P    P+FP   ++ H   P  
Sbjct: 353 RDDSDQQQQQQQQQDEEPEEIEEIHEGTQNQFTQPYTYP--THPMFPHHPHHPHPHHPHP 410

Query: 559 RFVPPTNSQNSFIHRPQSHVH 497
               P   Q+   H P  H H
Sbjct: 411 HHPHPHPHQHPHSHHPHQHPH 431


>UniRef50_Q47UH4 Cluster: Putative uncharacterized protein; n=1;
           Colwellia psychrerythraea 34H|Rep: Putative
           uncharacterized protein - Colwellia psychrerythraea
           (strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
          Length = 403

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = +2

Query: 356 KKYIEMKSQ*TEDKKKLANKTQP-RLASCELINLR*LDEPRPAGGFEDMNVALGPMNKTI 532
           KK  +++ Q TED+KK+++ T   ++     +N    D  +  GG  D ++    +N TI
Sbjct: 33  KKIAKLEKQDTEDQKKISSLTPDIKIGGAVRVNYNYSDSNKDRGGDLDFSLFRLDLNGTI 92

Query: 533 LRIRRWNESSLWYLNVTIVLH 595
             IR   E   WY  + +V H
Sbjct: 93  GDIRLSAEYR-WYTYMDVVHH 112


>UniRef50_Q9VA32 Cluster: CG12045-PA; n=3; Diptera|Rep: CG12045-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 241

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = -2

Query: 640 QPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSGLIK 461
           QP + P+   P+ PQ QY    Q PQ ++  P   Q ++      + H F  PG   L +
Sbjct: 174 QPAYNPQ---PVQPQQQYQPQYQQPQPQYQQP-QPQQAYYTTTTPNPHRFSPPGKLSLNR 229

Query: 460 LPQVDKFT 437
            P  D FT
Sbjct: 230 TP--DGFT 235


>UniRef50_A2FIU7 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1454

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 193  NTRSASLKTNFSLKHYN*WLTTNDSYNITK--KSLNIMAVYETLQNVSKNKNNMLK*KIH 366
            NT+S S K NF         + N + N+ +  K++N+ ++Y  L N   +KNN  K K  
Sbjct: 944  NTKSKSFKRNFKQNPIRKTSSDNSTKNVEEENKNVNVSSIYMELDN-DNDKNNNRKPKQT 1002

Query: 367  RNEKSI 384
            + + SI
Sbjct: 1003 KTQNSI 1008


>UniRef50_O96134 Cluster: Protein kinase, putative; n=4;
            Plasmodium|Rep: Protein kinase, putative - Plasmodium
            falciparum (isolate 3D7)
          Length = 2987

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +1

Query: 214  KTNFSLKHYN*WLTTNDSYNITKKSLNIMAVYETLQNVSKNKNNMLK*KIHRNEKSIN*R 393
            K  FS    N  +TT    N   K+LN++ + +++  + + KNNMLK   + N  S N +
Sbjct: 1222 KNTFSSCLINHNITTYTLQNGVNKNLNMLGIRDSIYKIDE-KNNMLKECYNGNNDSNNKK 1280

Query: 394  QKK 402
            +KK
Sbjct: 1281 KKK 1283


>UniRef50_Q3W047 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 123

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 371 FLCIFYFNMLFLFFDTFCKVS*TAIMLSDFFVM 273
           F  IF F +LFLFF +F  +  + + LS FF++
Sbjct: 28  FFIIFAFVLLFLFFSSFTSLLISPLSLSSFFIL 60


>UniRef50_Q5XDZ7 Cluster: DNA repair protein radA homolog; n=54;
           Bacteria|Rep: DNA repair protein radA homolog -
           Streptococcus pyogenes serotype M6
          Length = 453

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
 Frame = -3

Query: 684 WNSIVSQI*VFLVRR-NLNFFPE*IRPFFLKCSTIVTFKYHKLDSFHRRILRIVLF-IGP 511
           W+S V ++ V  V+   ++   E  RP  LK   +    YH+  +      R++   + P
Sbjct: 30  WSSFVEEVEVKEVKNARVSLAGEKSRPVKLK--DVDNISYHRTQTDMSEFNRVLGGGVVP 87

Query: 510 RATFMSSKPPAGLGSSSYLKLISSQLANRGCVL 412
            +  +    P G+G S+ L  +S+QLAN+G VL
Sbjct: 88  GSLILIGGDP-GIGKSTLLLQVSTQLANKGTVL 119


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,663,690
Number of Sequences: 1657284
Number of extensions: 13316502
Number of successful extensions: 32484
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32341
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)