Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_H02
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 32 0.49
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 32 0.49
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 31 0.86
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 31 0.86
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 31 0.86
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 31 0.86
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 31 0.86
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 31 1.1
Z81054-8|CAB02886.3| 341|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 29 3.5
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 29 3.5
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 29 4.6
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 29 4.6
AL132859-3|CAB60491.1| 346|Caenorhabditis elegans Hypothetical ... 29 4.6
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 29 4.6
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 29 4.6
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 28 6.0
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 28 6.0
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL132859-2|CAB60488.1| 315|Caenorhabditis elegans Hypothetical ... 28 6.0
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 28 8.0
AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 31.9 bits (69), Expect = 0.49
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -2
Query: 739 RNXFSQPPSCEESVCSEPMELDRFPNMSFFSKTQPQFFP-RMNSPIFPQMQYNSHVQIPQ 563
R +Q S SV P D P F + P P ++++P PQ QY + Q+P
Sbjct: 393 RKLSTQMGSSLSSVPPVPPPSDTVPLFHF---SPPSLSPCQISAPPPPQQQYTDYSQMPS 449
Query: 562 TRFVPPTNSQNSFIHRPQS 506
T P +S +RP S
Sbjct: 450 TSSYPANSSPFQSPYRPNS 468
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 31.9 bits (69), Expect = 0.49
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -2
Query: 739 RNXFSQPPSCEESVCSEPMELDRFPNMSFFSKTQPQFFP-RMNSPIFPQMQYNSHVQIPQ 563
R +Q S SV P D P F + P P ++++P PQ QY + Q+P
Sbjct: 393 RKLSTQMGSSLSSVPPVPPPSDTVPLFHF---SPPSLSPCQISAPPPPQQQYTDYSQMPS 449
Query: 562 TRFVPPTNSQNSFIHRPQS 506
T P +S +RP S
Sbjct: 450 TSSYPANSSPFQSPYRPNS 468
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = -2
Query: 643 TQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSGLI 464
T P P FP N+ +P T FVP T+ + + +P + F G +
Sbjct: 150 TNPIGSPASTPNRFPS---NNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGIANGFSMA 206
Query: 463 KLPQVDKF 440
PQV F
Sbjct: 207 PYPQVTDF 214
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = -2
Query: 643 TQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSGLI 464
T P P FP N+ +P T FVP T+ + + +P + F G +
Sbjct: 123 TNPIGSPASTPNRFPS---NNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGIANGFSMA 179
Query: 463 KLPQVDKF 440
PQV F
Sbjct: 180 PYPQVTDF 187
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = -2
Query: 643 TQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSGLI 464
T P P FP N+ +P T FVP T+ + + +P + F G +
Sbjct: 309 TNPIGSPASTPNRFPS---NNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGIANGFSMA 365
Query: 463 KLPQVDKF 440
PQV F
Sbjct: 366 PYPQVTDF 373
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = -2
Query: 643 TQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSGLI 464
T P P FP N+ +P T FVP T+ + + +P + F G +
Sbjct: 115 TNPIGSPASTPNRFPS---NNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGIANGFSMA 171
Query: 463 KLPQVDKF 440
PQV F
Sbjct: 172 PYPQVTDF 179
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = -2
Query: 643 TQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSGLI 464
T P P FP N+ +P T FVP T+ + + +P + F G +
Sbjct: 309 TNPIGSPASTPNRFPS---NNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGIANGFSMA 365
Query: 463 KLPQVDKF 440
PQV F
Sbjct: 366 PYPQVTDF 373
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = -2
Query: 643 TQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSGLI 464
T P P FP N+ +P T FVP T+ + + +P + F G +
Sbjct: 150 TNPIGSPASTPNRFPS---NNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGIANGFSMA 206
Query: 463 KLPQVDKF 440
PQV F
Sbjct: 207 PYPQVTDF 214
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = -2
Query: 643 TQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSGLI 464
T P P FP N+ +P T FVP T+ + + +P + F G +
Sbjct: 138 TNPIGSPASTPNRFPS---NNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGIANGFSMA 194
Query: 463 KLPQVDKF 440
PQV F
Sbjct: 195 PYPQVTDF 202
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -2
Query: 649 SKTQPQFFPRMNS--PIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVH 497
+ +QPQ FP S PQ YNS+ + R P +F PQ H H
Sbjct: 1217 TSSQPQHFPTEPSIRQPPPQQSYNSNQMLQNPRQQPQNQIVQNFQSAPQRHPH 1269
>Z81054-8|CAB02886.3| 341|Caenorhabditis elegans Hypothetical
protein F01D4.7 protein.
Length = 341
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -1
Query: 443 VHNSLIAAVSC*PIFFCLQFIDFSFLCIFYFNMLFLFFDTFC 318
+++ L++ +S I + F+++S L F+FN+ LFF FC
Sbjct: 30 LYHILLSVISMGSIIYF--FLNYSNLLAFHFNIKILFFFQFC 69
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = -2
Query: 667 PNMSFFSKTQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFK 488
P++ + K P + NSP+F + + + IPQ R P N N + R +V
Sbjct: 154 PSIHHYDKQPPPDI-QTNSPVFGNLNHRKNKLIPQARAKPGAN-DNEIVERDNDE-NVPT 210
Query: 487 TPGGSGLIKLP 455
T S I P
Sbjct: 211 TSDKSAFITSP 221
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = -2
Query: 667 PNMSFFSKTQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFK 488
P++ + K P + NSP+F + + + IPQ R P N N + R +V
Sbjct: 154 PSIHHYDKQPPPDI-QTNSPVFGNLNHRKNKLIPQARAKPGAN-DNEIVERDNDE-NVPT 210
Query: 487 TPGGSGLIKLP 455
T S I P
Sbjct: 211 TSDKSAFITSP 221
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -2
Query: 622 RMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSG 470
+ NS + P +Q N PQ+ P S SF P S V PGG G
Sbjct: 62 KKNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGPG 112
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 586 NSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTP-GGSG 470
+SH +PQ+ VP TN + RP + F+ P GG G
Sbjct: 502 SSHHLVPQSPSVPKTNYTVPVVQRPLTAPEKFRDPFGGPG 541
>AL132859-3|CAB60491.1| 346|Caenorhabditis elegans Hypothetical
protein Y39C12A.6 protein.
Length = 346
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = -3
Query: 375 FISMYFLF*HVIFILRYIL*SFINCHYVK*FFCYVVRIVSRKPLVVMFETKISFKTC*SR 196
FISM + +F ++ +++ H++ CY+V I++ + + K S
Sbjct: 149 FISMLTAY---VFNSTNLIFAYVGAHFLLNIVCYIVSIITYRINRNWYNDNRENKHDYS- 204
Query: 195 VGARYWLYENIKNYYIVTIFLYM 127
+G R+ + ENIK Y + +L++
Sbjct: 205 LGTRFQISENIKVYKFFSHYLFV 227
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 359 KYIEMKSQ*TEDKKKLANKTQPRLASCELINLR*LDEPRPAGGFEDMNVALGPMNKTILR 538
K ++ KSQ E+K+ + N TQ L E+I+ +D + FE + P+NK +
Sbjct: 744 KSLKEKSQQLEEKRSITNNTQRLLEETEIIHKILVDTLKAQEIFESES----PLNKITVM 799
Query: 539 IRRWNESS 562
R E+S
Sbjct: 800 TSRICETS 807
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = -2
Query: 667 PNMSFFSKTQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFK 488
PN + PQ P+ P Q+Q N Q P + + + +PQ H+ +
Sbjct: 399 PNTPYTPAGMPQPQPQQQPPQMVQVQPNLQGQQPNMQMW----AGQPLVQQPQQPHHIHQ 454
Query: 487 TPGGSGLIKLPQV 449
P ++LPQV
Sbjct: 455 QPAQLHPVQLPQV 467
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -2
Query: 616 NSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSG 470
NS + P +Q N PQ+ P S SF P S V PGG G
Sbjct: 355 NSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGPG 403
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -2
Query: 616 NSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSG 470
NS + P +Q N PQ+ P S SF P S V PGG G
Sbjct: 368 NSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGPG 416
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -2
Query: 616 NSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSG 470
NS + P +Q N PQ+ P S SF P S V PGG G
Sbjct: 355 NSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGPG 403
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -2
Query: 616 NSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQSHVHVFKTPGGSG 470
NS + P +Q N PQ+ P S SF P S V PGG G
Sbjct: 368 NSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGPG 416
>AL132859-2|CAB60488.1| 315|Caenorhabditis elegans Hypothetical
protein Y39C12A.3 protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 303 CHYVK*FFCYVVRIVS-RKPLVVMFETKISFKTC*SRVGARYWLYENIKNYYIVTIFLYM 127
CH+ F CY+V +++ R + ++ + +G RY + EN++ Y + +L++
Sbjct: 163 CHFSFIFVCYIVSVITYRTNRRYYYNNRVDQHS--YSLGERYQISENLRLYMFFSHYLFV 220
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 688 PMELDRFPNMSFFSKTQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQ 509
P + + P +++ Q Q P+ N Q QY Q PQ +QN+++ +PQ
Sbjct: 349 PYQQFQQPQQQQYNQQQQQQTPQQNQ-YNQQQQYGQQPQQPQQPHQQQYQNQNNYLPQPQ 407
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 688 PMELDRFPNMSFFSKTQPQFFPRMNSPIFPQMQYNSHVQIPQTRFVPPTNSQNSFIHRPQ 509
P + + P +++ Q Q P+ N Q QY Q PQ +QN+++ +PQ
Sbjct: 351 PYQQFQQPQQQQYNQQQQQQTPQQNQ-YNQQQQYGQQPQQPQQPHQQQYQNQNNYLPQPQ 409
>AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical
protein Y43F8A.5 protein.
Length = 475
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 450 LISSQLANRGCVLLANFFLSSVY*LFISMYFL 355
LISSQL N G + A+FFL + + F+S F+
Sbjct: 176 LISSQLKNFGYLGAASFFLVAHFIAFMSAVFM 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,490,772
Number of Sequences: 27780
Number of extensions: 343554
Number of successful extensions: 895
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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