Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G24
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001641-1|AAN71396.1|  455|Drosophila melanogaster RE40943p pro...    29   9.3  
AY071077-1|AAL48699.1|  438|Drosophila melanogaster RE14694p pro...    29   9.3  
AE014297-4496|AAF56981.1|  438|Drosophila melanogaster CG7899-PA...    29   9.3  
AE014297-4495|AAN14203.1|  455|Drosophila melanogaster CG7899-PB...    29   9.3  

>BT001641-1|AAN71396.1|  455|Drosophila melanogaster RE40943p
           protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -1

Query: 215 YFCGMLFTILKCNVTFRSFAKDVFNRDEVSDLSNFMCGICLESEERCLIENGPCXK 48
           Y    LF     N+T   + K V+ R+E++ +SNF   I   + +   ++ GP  K
Sbjct: 237 YLNNTLFIENLYNMTLPKWTKMVYGREELTYVSNFAFAISSYTRKLARLKAGPLLK 292


>AY071077-1|AAL48699.1|  438|Drosophila melanogaster RE14694p
           protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -1

Query: 215 YFCGMLFTILKCNVTFRSFAKDVFNRDEVSDLSNFMCGICLESEERCLIENGPCXK 48
           Y    LF     N+T   + K V+ R+E++ +SNF   I   + +   ++ GP  K
Sbjct: 220 YLNNTLFIENLYNMTLPKWTKMVYGREELTYVSNFAFAISSYTRKLARLKAGPLLK 275


>AE014297-4496|AAF56981.1|  438|Drosophila melanogaster CG7899-PA,
           isoform A protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -1

Query: 215 YFCGMLFTILKCNVTFRSFAKDVFNRDEVSDLSNFMCGICLESEERCLIENGPCXK 48
           Y    LF     N+T   + K V+ R+E++ +SNF   I   + +   ++ GP  K
Sbjct: 220 YLNNTLFIENLYNMTLPKWTKMVYGREELTYVSNFAFAISSYTRKLARLKAGPLLK 275


>AE014297-4495|AAN14203.1|  455|Drosophila melanogaster CG7899-PB,
           isoform B protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -1

Query: 215 YFCGMLFTILKCNVTFRSFAKDVFNRDEVSDLSNFMCGICLESEERCLIENGPCXK 48
           Y    LF     N+T   + K V+ R+E++ +SNF   I   + +   ++ GP  K
Sbjct: 237 YLNNTLFIENLYNMTLPKWTKMVYGREELTYVSNFAFAISSYTRKLARLKAGPLLK 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,406,261
Number of Sequences: 53049
Number of extensions: 465044
Number of successful extensions: 730
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)