Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G23
         (469 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542155-1|CAG46952.1|   94|Homo sapiens ATP5J2 protein.               48   1e-05
CR456891-1|CAG33172.1|   94|Homo sapiens ATP5J2 protein.               48   1e-05
AY046911-1|AAL06647.1|   88|Homo sapiens F1Fo-ATP synthase compl...    48   1e-05
AF088918-1|AAC34895.1|   94|Homo sapiens F1F0-type ATPase subuni...    48   1e-05
AK223348-1|BAD97068.1|   94|Homo sapiens ATP synthase, H+ transp...    48   2e-05
BC003678-1|AAH03678.1|   94|Homo sapiens ATP synthase, H+ transp...    47   3e-05
U80759-1|AAB91450.1|  182|Homo sapiens CAGH4 alternate open read...    29   8.0  

>CR542155-1|CAG46952.1|   94|Homo sapiens ATP5J2 protein.
          Length = 94

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = -2

Query: 303 DTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQXKKVGMAPFYQLLVGSM 124
           D    ++KL E+ SW   R  +PS + GAF R ++R+ +KY+  KK  ++    +L   +
Sbjct: 15  DKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYV 74

Query: 123 VFFYAIN 103
           +F Y+ +
Sbjct: 75  LFSYSFS 81


>CR456891-1|CAG33172.1|   94|Homo sapiens ATP5J2 protein.
          Length = 94

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = -2

Query: 303 DTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQXKKVGMAPFYQLLVGSM 124
           D    ++KL E+ SW   R  +PS + GAF R ++R+ +KY+  KK  ++    +L   +
Sbjct: 15  DKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYV 74

Query: 123 VFFYAIN 103
           +F Y+ +
Sbjct: 75  LFSYSFS 81


>AY046911-1|AAL06647.1|   88|Homo sapiens F1Fo-ATP synthase complex
           Fo membrane domain f subunit protein.
          Length = 88

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = -2

Query: 303 DTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQXKKVGMAPFYQLLVGSM 124
           D    ++KL E+ SW   R  +PS + GAF R ++R+ +KY+  KK  ++    +L   +
Sbjct: 9   DKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYV 68

Query: 123 VFFYAIN 103
           +F Y+ +
Sbjct: 69  LFSYSFS 75


>AF088918-1|AAC34895.1|   94|Homo sapiens F1F0-type ATPase subunit f
           protein.
          Length = 94

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = -2

Query: 303 DTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQXKKVGMAPFYQLLVGSM 124
           D    ++KL E+ SW   R  +PS + GAF R ++R+ +KY+  KK  ++    +L   +
Sbjct: 15  DKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYV 74

Query: 123 VFFYAIN 103
           +F Y+ +
Sbjct: 75  LFSYSFS 81


>AK223348-1|BAD97068.1|   94|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit f
           isoform 2a v protein.
          Length = 94

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = -2

Query: 303 DTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQXKKVGMAPFYQLLVGSM 124
           D    ++KL E+ SW   R  +PS + GAF R ++R+ +KY+  KK  ++    +L   +
Sbjct: 15  DKKLLEVKLGELPSWVLMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYV 74

Query: 123 VFFYAIN 103
           +F Y+ +
Sbjct: 75  LFSYSFS 81


>BC003678-1|AAH03678.1|   94|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F2
           protein.
          Length = 94

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = -2

Query: 303 DTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQXKKVGMAPFYQLLVGSM 124
           D    ++KL E+ SW   R  +PS + GAF R ++R+ +KY+  KK  ++    +L   +
Sbjct: 15  DKKLLEVKLLELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYV 74

Query: 123 VFFYAIN 103
           +F Y+ +
Sbjct: 75  LFSYSFS 81


>U80759-1|AAB91450.1|  182|Homo sapiens CAGH4 alternate open reading
           frame protein.
          Length = 182

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = -3

Query: 236 RLPWPELSVEPGGDGNISTYNXRRLAWLHSTNYSLAAWSSSMP 108
           R PW   S    G         +  AWLH  + SL  WS S P
Sbjct: 69  RPPWTPCSRPTRGCSTTQQPTQQPTAWLHLRSRSLQPWSPSSP 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,749,643
Number of Sequences: 237096
Number of extensions: 1412381
Number of successful extensions: 3102
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3102
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)