Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G23
         (469 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical pr...    68   3e-12
Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical pr...    27   5.1  
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ...    27   6.7  
AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical
           protein R53.4 protein.
          Length = 153

 Score = 68.1 bits (159), Expect = 3e-12
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = -2

Query: 375 GDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWR 196
           G + K +N  VHGPY   RYYGK DT F  +KL ++ +W  RR KTPSA    F R  WR
Sbjct: 47  GLFDKRWNKNVHGPYCHWRYYGKLDTKFMDVKLGDLPAWMARREKTPSAFYNEFMRNIWR 106

Query: 195 WQHKY 181
             + Y
Sbjct: 107 VHNLY 111


>Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical
           protein C26D10.4 protein.
          Length = 839

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 352 IILLGVITESHIFRKARCTXLKINSSXYLPN 444
           I+ LG      IF K +C  L+IN+S  LP+
Sbjct: 570 IVSLGFTNILDIFEKLQCCGLRINTSSDLPH 600


>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
           protein F28H6.4 protein.
          Length = 1000

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = -3

Query: 335 LTILPATMXNLILHSAS*S*TKSVRGS--VAAARLRLPWPELSVEPGGDGNISTYNXRRL 162
           +TILP      +  S   S T+S+RG+   +  R  +  P+L+  P    ++S  N  +L
Sbjct: 697 VTILPKANIRSVPRSNLTSETQSMRGANLYSPMRQEIVQPKLTPVPTKQAHLS--NATKL 754

Query: 161 AWLHSTNYSLAAWSSSMPSTXEE 93
           A    T  S  A+S+++ ST ++
Sbjct: 755 AQKQPTASSGPAYSATVMSTAKD 777


>AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical
           protein T05B4.8 protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 224 PELSVEPGGDGNISTYNXRRLAWLHS 147
           PE S   GGD N +TYN     W  S
Sbjct: 77  PEASAVIGGDLNCTTYNGTAFVWTPS 102


>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 315 YGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFS 211
           +  PD P  Q K+N+I   +   S  PS+ +G+ +
Sbjct: 34  FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLA 68


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 315 YGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFS 211
           +  PD P  Q K+N+I   +   S  PS+ +G+ +
Sbjct: 34  FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLA 68


>AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical
           protein Y2H9A.3 protein.
          Length = 291

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 330 DPARYYGKPDTPFSQLKLNEIGSWFG--RRSKTPSAVAGAFSRA 205
           D   +Y +      + KLNE G+W G   R++ PS +   F RA
Sbjct: 31  DINEFYDQTMETMDEFKLNERGAWHGMVERTRAPSEI--LFGRA 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,805,006
Number of Sequences: 27780
Number of extensions: 199837
Number of successful extensions: 497
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)