Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G22
         (635 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0279 - 15249361-15249612,15251270-15251506,15252704-152527...    33   0.14 
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324...    32   0.44 
02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245...    28   7.1  

>08_02_0279 -
           15249361-15249612,15251270-15251506,15252704-15252772,
           15252845-15252895,15254009-15254056,15254187-15254267,
           15256219-15256257,15256486-15256551,15258113-15258236,
           15258576-15258696,15258771-15258900,15259692-15259853
          Length = 459

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = -2

Query: 472 ITYYPRFPDYKDPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEI 293
           + ++PRFPD K   + P +L R   +K   H   W  + + E++  EE  +   + I   
Sbjct: 338 VAFHPRFPDNKLSAVPPLRLKRERELKRRPHQNGWLFKRVPEMRDPEEPVMLFTRPIDPD 397

Query: 292 NAKLWKIK 269
             K+  I+
Sbjct: 398 KLKMAGIR 405


>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
            3242494-3242836,3244138-3248540,3248928-3249107,
            3249108-3250892,3251055-3252173
          Length = 2727

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
 Frame = -2

Query: 370  WQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILK 191
            W K +LD+L    +    V  +I EI  K+            E+        +I+ ++L+
Sbjct: 2551 WSKNVLDKLASDAQRLSIVQASIEEIKQKMVGASKGKSTVSSEYSSIRAQLQEIDGSVLE 2610

Query: 190  E-NGQCLVTKKLE--PEFGQIQALEEFDSDRK 104
            + +  C VTKK E  P F     LE + S RK
Sbjct: 2611 QIDFNCNVTKKAENYPAFEVSAELEGYSSRRK 2642


>02_05_0258 +
           27222058-27223198,27223297-27223460,27224399-27224575,
           27224713-27224761,27224991-27225793
          Length = 777

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -2

Query: 370 WQKRILDELKIHEETRVTVVKN 305
           W+K++ DE+K  E+ R+ + KN
Sbjct: 426 WEKKLYDEVKAEEKMRLLLAKN 447


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,640,130
Number of Sequences: 37544
Number of extensions: 306308
Number of successful extensions: 678
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)