SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G22
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000217-1|AAH00217.1|  161|Homo sapiens mitochondrial ribosomal...    85   2e-16
AK126402-1|BAC86542.1|  191|Homo sapiens protein ( Homo sapiens ...    85   2e-16
BC022391-1|AAH22391.1|  161|Homo sapiens mitochondrial ribosomal...    83   8e-16
AC092587-4|AAX88929.1|  161|Homo sapiens unknown protein.              83   8e-16
AB051342-1|BAB54932.1|   68|Homo sapiens mitochondrial ribosomal...    56   1e-07
AJ306929-1|CAC84902.1|  701|Homo sapiens hypothetical protein pr...    32   1.5  
M63871-1|AAA59984.1|  508|Homo sapiens CYP17 protein.                  30   6.0  
M31153-1|AAA52140.1|  508|Homo sapiens CYP17 protein.                  30   6.0  
M19489-1|AAA36405.1|  508|Homo sapiens CYP17 protein.                  30   6.0  
M14564-1|AAA52151.1|  508|Homo sapiens CYP17 protein.                  30   6.0  
DQ530598-1|ABF50972.1|  508|Homo sapiens cytochrome P450, family...    30   6.0  
BT020000-1|AAV38803.1|  508|Homo sapiens cytochrome P450, family...    30   6.0  
BC063388-1|AAH63388.1|  508|Homo sapiens cytochrome P450, family...    30   6.0  
BC062997-1|AAH62997.1|  508|Homo sapiens cytochrome P450, family...    30   6.0  
AL358790-3|CAI52498.1|  508|Homo sapiens cytochrome P450, family...    30   6.0  

>BC000217-1|AAH00217.1|  161|Homo sapiens mitochondrial ribosomal
           protein L30 protein.
          Length = 161

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 42/96 (43%), Positives = 61/96 (63%)
 Frame = -2

Query: 439 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 260
           DP+  P KL  V RIKS++  PYW+K I+  L + +     V KNIP +NAKL  +KHLI
Sbjct: 59  DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 117

Query: 259 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 152
           +I P++ P G PT ++++ T LK  G+ +V   L+P
Sbjct: 118 RIKPLKLPQGLPTEENMSNTCLKSTGELVVQWHLKP 153


>AK126402-1|BAC86542.1|  191|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44438 fis, clone UTERU2019940, moderately
           similar to Homo sapiens mitochondrial ribosomal protein
           L30 (MRPL30). ).
          Length = 191

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 42/96 (43%), Positives = 61/96 (63%)
 Frame = -2

Query: 439 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 260
           DP+  P KL  V RIKS++  PYW+K I+  L + +     V KNIP +NAKL  +KHLI
Sbjct: 89  DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 147

Query: 259 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 152
           +I P++ P G PT ++++ T LK  G+ +V   L+P
Sbjct: 148 RIKPLKLPQGLPTEENMSNTCLKSTGELVVQWHLKP 183


>BC022391-1|AAH22391.1|  161|Homo sapiens mitochondrial ribosomal
           protein L30 protein.
          Length = 161

 Score = 83.0 bits (196), Expect = 8e-16
 Identities = 41/96 (42%), Positives = 60/96 (62%)
 Frame = -2

Query: 439 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 260
           DP+  P KL  V RIKS++  PYW+K I+  L + +     V KNIP +NAKL  +KHLI
Sbjct: 59  DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 117

Query: 259 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 152
           +I P++ P G P  ++++ T LK  G+ +V   L+P
Sbjct: 118 RIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKP 153


>AC092587-4|AAX88929.1|  161|Homo sapiens unknown protein.
          Length = 161

 Score = 83.0 bits (196), Expect = 8e-16
 Identities = 41/96 (42%), Positives = 60/96 (62%)
 Frame = -2

Query: 439 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 260
           DP+  P KL  V RIKS++  PYW+K I+  L + +     V KNIP +NAKL  +KHLI
Sbjct: 59  DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 117

Query: 259 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 152
           +I P++ P G P  ++++ T LK  G+ +V   L+P
Sbjct: 118 RIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKP 153


>AB051342-1|BAB54932.1|   68|Homo sapiens mitochondrial ribosomal
           protein L30 protein.
          Length = 68

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 25/55 (45%), Positives = 37/55 (67%)
 Frame = -2

Query: 316 VVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 152
           V KNIP +NAKL  +KHLI+I P++ P G P  ++++ T LK  G+ +V   L+P
Sbjct: 6   VHKNIPSVNAKLKVVKHLIRIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKP 60


>AJ306929-1|CAC84902.1|  701|Homo sapiens hypothetical protein
           protein.
          Length = 701

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
 Frame = +2

Query: 26  FNLKSPSISCLPSLSR-----LSFXGCXIHLFSITIKFF*GLDLAEFRFQFFCNQALTIF 190
           F  K+PSISC+P+L R     L    C + LFSI         L  F      +  L +F
Sbjct: 634 FTSKTPSISCVPNLIREGRAALITSSCELALFSIVT-----YSLDHFIISILISSMLVLF 688

Query: 191 FKDCVVYIICSWFSI 235
           F D   +  C+++S+
Sbjct: 689 FSD---FHNCAFYSL 700


>M63871-1|AAA59984.1|  508|Homo sapiens CYP17 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


>M31153-1|AAA52140.1|  508|Homo sapiens CYP17 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


>M19489-1|AAA36405.1|  508|Homo sapiens CYP17 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


>M14564-1|AAA52151.1|  508|Homo sapiens CYP17 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


>DQ530598-1|ABF50972.1|  508|Homo sapiens cytochrome P450, family
           17, subfamily A, polypeptide 1 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


>BT020000-1|AAV38803.1|  508|Homo sapiens cytochrome P450, family
           17, subfamily A, polypeptide 1 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


>BC063388-1|AAH63388.1|  508|Homo sapiens cytochrome P450, family
           17, subfamily A, polypeptide 1 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


>BC062997-1|AAH62997.1|  508|Homo sapiens cytochrome P450, family
           17, subfamily A, polypeptide 1 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


>AL358790-3|CAI52498.1|  508|Homo sapiens cytochrome P450, family
           17, subfamily A, polypeptide 1 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -3

Query: 315 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 136
           WLKI+    L   KS + ++   LN ++EN  +    + S+  M++  +Q   N ++  +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278

Query: 135 RP 130
            P
Sbjct: 279 GP 280


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,036,432
Number of Sequences: 237096
Number of extensions: 1771167
Number of successful extensions: 3703
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3703
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -