Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G22
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100305-1|AAC68918.1|  197|Caenorhabditis elegans Hypothetical ...    65   5e-11
AF003739-7|AAB58068.1|  339|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z75530-4|CAA99794.2|  357|Caenorhabditis elegans Hypothetical pr...    28   6.4  
X66104-1|CAA46899.1|  557|Caenorhabditis elegans esterase protein.     27   8.5  

>AF100305-1|AAC68918.1|  197|Caenorhabditis elegans Hypothetical
           protein W04B5.4 protein.
          Length = 197

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
 Frame = -2

Query: 421 SKLFRVERIKSSKHFPYWQKRILDEL--KIHEETRVTVVKNIPEINAKLWKIKHLIKITP 248
           SKL+     + +   P W K+ ++ L     +  R+ V +N   IN +LWKIKHLI++ P
Sbjct: 57  SKLWMAWLYRDTSAEPKWTKKHVENLFGADFKVGRMEVFRNTELINTELWKIKHLIELRP 116

Query: 247 IEFPYG-EPTADDINYTILKENGQCLV 170
           +EF  G EPT DDI  T L  NGQC V
Sbjct: 117 VEFKNGVEPTEDDIFSTSLAPNGQCEV 143


>AF003739-7|AAB58068.1|  339|Caenorhabditis elegans Hypothetical
           protein M01D7.1 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 284 FSIDFWYIFNHSDSGLLMNFQFIQYPFLP-VWKMFA*FNSLY 406
           FS+DFW  +    S     F  I+Y  LP +WK    FN L+
Sbjct: 132 FSLDFWIEWFCKSSADKKIFPIIKYTKLPKLWKFLNIFNELF 173


>Z75530-4|CAA99794.2|  357|Caenorhabditis elegans Hypothetical
           protein C47E8.6 protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = -2

Query: 403 ERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGEP 224
           E++++     Y    +   +K  +ET++  +K   EI  +   +KH+ +I  IE    E 
Sbjct: 217 EKLEAQSDLKYAIVHLEQRMKEEQETQMQAMKEEREIEIEEIGLKHMEQIRTIESGNSEQ 276

Query: 223 TA 218
           TA
Sbjct: 277 TA 278


>X66104-1|CAA46899.1|  557|Caenorhabditis elegans esterase protein.
          Length = 557

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 145 GQIQALEEFDSDRKKMNXTTXKRETRQRW 59
           G+IQ LE+ D D  K    + +R +RQR+
Sbjct: 526 GRIQFLEKIDGDSDKYQNWSMERRSRQRF 554


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,983,360
Number of Sequences: 27780
Number of extensions: 294979
Number of successful extensions: 817
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)