Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G22
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.3  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   5.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = -2

Query: 535 WFLSFDQKVINIQEVFVXPGGITYYPRFPDYKDPEITPSKLFRVERIKSSKHFPYWQKRI 356
           W+L+ D  + N    F+   G+  Y  F     P   PSK + +   +  ++  Y  K +
Sbjct: 208 WYLNHDYNLENKLNYFIEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYRGEEYL-YSHKLL 266

Query: 355 LD 350
           L+
Sbjct: 267 LN 268


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 487 VXPGGITYYPRFPDYKDPEIT 425
           V  GG T YP   D    EIT
Sbjct: 73  VLSGGTTMYPGIADRMQKEIT 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,918
Number of Sequences: 438
Number of extensions: 4214
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)