Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_G09
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000617-1|AAH00617.1| 264|Homo sapiens NADH dehydrogenase (ubi... 329 5e-90
AF200954-1|AAG17541.1| 264|Homo sapiens NADH dehydrogenase-ubiq... 329 5e-90
AF100743-1|AAD40386.1| 263|Homo sapiens NADH-Ubiquinone reducta... 329 5e-90
AF067139-1|AAC27451.1| 264|Homo sapiens NADH:ubiquinone oxidore... 329 5e-90
AK223255-1|BAD96975.1| 264|Homo sapiens NADH dehydrogenase (ubi... 328 2e-89
AL135819-1|CAB63881.1| 190|Homo sapiens hypothetical protein pr... 303 5e-82
>BC000617-1|AAH00617.1| 264|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q
reductas protein.
Length = 264
Score = 329 bits (809), Expect = 5e-90
Identities = 147/195 (75%), Positives = 173/195 (88%)
Frame = -3
Query: 682 QLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAG 503
QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+
Sbjct: 57 QLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTA 116
Query: 502 MDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGV 323
+DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GV
Sbjct: 117 VDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGV 176
Query: 322 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELS 143
FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L+
Sbjct: 177 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLN 236
Query: 142 APWEQFPNFRANPVS 98
+PWE FP +R P S
Sbjct: 237 SPWEAFPVYRQPPES 251
>AF200954-1|AAG17541.1| 264|Homo sapiens NADH
dehydrogenase-ubiquinone 30 kDa subunit protein.
Length = 264
Score = 329 bits (809), Expect = 5e-90
Identities = 147/195 (75%), Positives = 173/195 (88%)
Frame = -3
Query: 682 QLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAG 503
QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+
Sbjct: 57 QLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTA 116
Query: 502 MDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGV 323
+DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GV
Sbjct: 117 VDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGV 176
Query: 322 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELS 143
FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L+
Sbjct: 177 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLN 236
Query: 142 APWEQFPNFRANPVS 98
+PWE FP +R P S
Sbjct: 237 SPWEAFPVYRQPPES 251
>AF100743-1|AAD40386.1| 263|Homo sapiens NADH-Ubiquinone reductase
protein.
Length = 263
Score = 329 bits (809), Expect = 5e-90
Identities = 147/195 (75%), Positives = 173/195 (88%)
Frame = -3
Query: 682 QLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAG 503
QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+
Sbjct: 56 QLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTA 115
Query: 502 MDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGV 323
+DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GV
Sbjct: 116 VDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGV 175
Query: 322 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELS 143
FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L+
Sbjct: 176 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLN 235
Query: 142 APWEQFPNFRANPVS 98
+PWE FP +R P S
Sbjct: 236 SPWEAFPVYRQPPES 250
>AF067139-1|AAC27451.1| 264|Homo sapiens NADH:ubiquinone
oxidoreductase NDUFS3 subunit protein.
Length = 264
Score = 329 bits (809), Expect = 5e-90
Identities = 147/195 (75%), Positives = 173/195 (88%)
Frame = -3
Query: 682 QLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAG 503
QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+
Sbjct: 57 QLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTA 116
Query: 502 MDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGV 323
+DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GV
Sbjct: 117 VDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGV 176
Query: 322 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELS 143
FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L+
Sbjct: 177 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLN 236
Query: 142 APWEQFPNFRANPVS 98
+PWE FP +R P S
Sbjct: 237 SPWEAFPVYRQPPES 251
>AK223255-1|BAD96975.1| 264|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q
reductas protein.
Length = 264
Score = 328 bits (805), Expect = 2e-89
Identities = 146/195 (74%), Positives = 173/195 (88%)
Frame = -3
Query: 682 QLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAG 503
QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+
Sbjct: 57 QLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTA 116
Query: 502 MDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGV 323
+DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GV
Sbjct: 117 VDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGV 176
Query: 322 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELS 143
FFANHPDLRRILTDYGFEGHPF+KDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L+
Sbjct: 177 FFANHPDLRRILTDYGFEGHPFQKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLN 236
Query: 142 APWEQFPNFRANPVS 98
+PWE FP +R P S
Sbjct: 237 SPWEAFPVYRQPPES 251
>AL135819-1|CAB63881.1| 190|Homo sapiens hypothetical protein
protein.
Length = 190
Score = 303 bits (743), Expect = 5e-82
Identities = 134/177 (75%), Positives = 158/177 (89%)
Frame = -3
Query: 628 KVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILS 449
+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LS
Sbjct: 1 QVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLS 60
Query: 448 LRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGFE 269
LR+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGFE
Sbjct: 61 LRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFE 120
Query: 268 GHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANPVS 98
GHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L++PWE FP +R P S
Sbjct: 121 GHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPES 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,826,249
Number of Sequences: 237096
Number of extensions: 2162075
Number of successful extensions: 3619
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3619
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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