Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_G09
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97403-5|AAO21397.1| 268|Caenorhabditis elegans Hypothetical pr... 315 2e-86
U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical pr... 315 2e-86
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 31 0.82
U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical p... 31 1.1
Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF117337-1|AAD22029.1| 277|Caenorhabditis elegans Hus1-like pro... 28 5.8
AF106587-2|AAC78225.1| 277|Caenorhabditis elegans Human hus1 re... 28 5.8
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 7.6
>U97403-5|AAO21397.1| 268|Caenorhabditis elegans Hypothetical
protein T10E9.7b protein.
Length = 268
Score = 315 bits (773), Expect = 2e-86
Identities = 138/205 (67%), Positives = 170/205 (82%)
Frame = -3
Query: 706 KLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQF 527
K+D ++ +L +FGKY A+CLPK+VQKVQ AG+ELE+LI P V+PVLSFLK +HSAQF
Sbjct: 46 KIDEHKRERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKGNHSAQF 105
Query: 526 ANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYER 347
NL I GMDVP+R NR E+IY++ S+R+NAR+RV+TYTDE+ P+DSA VFK A+W+ER
Sbjct: 106 TNLTFITGMDVPTRKNRLEVIYSLYSVRFNARVRVRTYTDEIAPIDSATPVFKGADWFER 165
Query: 346 EIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQ 167
E++DMYGV+F NHPDLRRILTDYGFEGHPFRKD+PLSGY EVRYD E KRVV EP ELAQ
Sbjct: 166 EVYDMYGVWFNNHPDLRRILTDYGFEGHPFRKDYPLSGYNEVRYDPELKRVVYEPSELAQ 225
Query: 166 EFRRFELSAPWEQFPNFRANPVSRG 92
EFR+F+L+ PWE FP FR ++ G
Sbjct: 226 EFRKFDLNTPWETFPAFRNQSITSG 250
>U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical
protein T10E9.7a protein.
Length = 445
Score = 315 bits (773), Expect = 2e-86
Identities = 138/205 (67%), Positives = 170/205 (82%)
Frame = -3
Query: 706 KLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQF 527
K+D ++ +L +FGKY A+CLPK+VQKVQ AG+ELE+LI P V+PVLSFLK +HSAQF
Sbjct: 223 KIDEHKRERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKGNHSAQF 282
Query: 526 ANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYER 347
NL I GMDVP+R NR E+IY++ S+R+NAR+RV+TYTDE+ P+DSA VFK A+W+ER
Sbjct: 283 TNLTFITGMDVPTRKNRLEVIYSLYSVRFNARVRVRTYTDEIAPIDSATPVFKGADWFER 342
Query: 346 EIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQ 167
E++DMYGV+F NHPDLRRILTDYGFEGHPFRKD+PLSGY EVRYD E KRVV EP ELAQ
Sbjct: 343 EVYDMYGVWFNNHPDLRRILTDYGFEGHPFRKDYPLSGYNEVRYDPELKRVVYEPSELAQ 402
Query: 166 EFRRFELSAPWEQFPNFRANPVSRG 92
EFR+F+L+ PWE FP FR ++ G
Sbjct: 403 EFRKFDLNTPWETFPAFRNQSITSG 427
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 31.1 bits (67), Expect = 0.82
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = -3
Query: 682 QLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAG 503
+ +DFG + C+ + + + + + E ++P + + + S L D H + N
Sbjct: 508 EFIDFGLDLQACIELIEKPLGIVSMLDEECIVPKASDLTLASKLNDQHLGKHPNFQKPRP 567
Query: 502 MDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKA--ANWYEREIWDMY 329
I++ ++RYN + ++ D L D+A V KA N ++W Y
Sbjct: 568 PKGKQAEAHLAIVHYAGTVRYNVKGWLEKNKDPLN--DTAVTVLKANKGNQLMADLWADY 625
>U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical
protein R12C12.1a protein.
Length = 979
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 282 SVKILLKSGWLAKNTPYMSQISRSYQFAALN--TSQAESTGV 401
S IL GW+++ TPY ++IS+ + LN T AE TG+
Sbjct: 115 SRNILQNIGWISQYTPYQAEISQGRLESLLNFQTMIAEMTGL 156
>Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical
protein C26C6.4b protein.
Length = 341
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 341 DLSFVPICGLEYIAG*VYRSQLVSVSFDSYSGIVT*RKY 457
D+ IC LE+I G + S+LV++SFD+ S ++ KY
Sbjct: 46 DIFLNHICNLEFIPGAL--SRLVAISFDTPSHLILKEKY 82
>Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical
protein C26C6.4a protein.
Length = 424
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 341 DLSFVPICGLEYIAG*VYRSQLVSVSFDSYSGIVT*RKY 457
D+ IC LE+I G + S+LV++SFD+ S ++ KY
Sbjct: 129 DIFLNHICNLEFIPGAL--SRLVAISFDTPSHLILKEKY 165
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = -3
Query: 580 DAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIR--VKTYTD 407
D IP+ + L H F + M++P R EI+ + +RY + R K D
Sbjct: 19 DCRIPLHNELAYQHGIHFEAKY-VGSMEIPRPGTRIEIVAAMRRVRYEFKARGIKKRPVD 77
Query: 406 ELTPVDSACDVFKAANWYEREI-WDMYGVFFANHPDLR 296
VD V + E+ + WD + HP R
Sbjct: 78 ITVSVDGVKVVLQRKKQKEKGLSWDESKLLVMFHPIYR 115
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = -3
Query: 580 DAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIR--VKTYTD 407
D IP+ + L H F + M++P R EI+ + +RY + R K D
Sbjct: 19 DCRIPLHNELAYQHGIHFEAKY-VGSMEIPRPGTRIEIVAAMRRVRYEFKARGIKKRPVD 77
Query: 406 ELTPVDSACDVFKAANWYEREI-WDMYGVFFANHPDLR 296
VD V + E+ + WD + HP R
Sbjct: 78 ITVSVDGVKVVLQRKKQKEKGLSWDESKLLVMFHPIYR 115
>AF117337-1|AAD22029.1| 277|Caenorhabditis elegans Hus1-like
protein protein.
Length = 277
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 309 WLAKNTPYMSQISRSYQFAALNTSQAESTGVNSSV*VLTLIRAL 440
W + + PY SQI R + +N E + + + +L+R L
Sbjct: 54 WFSLSIPYSSQIFRKFDMVGMNPRNEEQNLIYFELEIDSLVRVL 97
>AF106587-2|AAC78225.1| 277|Caenorhabditis elegans Human hus1
related protein 1 protein.
Length = 277
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 309 WLAKNTPYMSQISRSYQFAALNTSQAESTGVNSSV*VLTLIRAL 440
W + + PY SQI R + +N E + + + +L+R L
Sbjct: 54 WFSLSIPYSSQIFRKFDMVGMNPRNEEQNLIYFELEIDSLVRVL 97
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = -3
Query: 496 VPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFF 317
+ R+ I ++ L+Y ++ + TYTD+++ + + C + + +Y
Sbjct: 70 IECRTCGHSISFHAEPLKYLSQEDLDTYTDQISDLQTCCSELSEIDPSHESLQTLYITMQ 129
Query: 316 ANHPDLRRIL-TDYGFEGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFEL 146
LR + D F G P + LS Y+ V+ K + P++ A++ R E+
Sbjct: 130 ILLKSLRTLTPVDVPFIGKPNFEPESLSPYILVK-----KFIASRPVDNAEKQRLAEI 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,241,701
Number of Sequences: 27780
Number of extensions: 349230
Number of successful extensions: 771
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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