Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G09
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 321 NTPYMSQISRSYQFAALNTSQAESTGVNS 407
           NTP  S IS S     + +  A ST +NS
Sbjct: 840 NTPTTSVISMSGTTVPITSLPASSTSINS 868


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 666 PKSTSCAFWS 695
           P++T CAFW+
Sbjct: 569 PRTTYCAFWN 578


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 154 FELSAPWEQFP 122
           FELS  W+Q+P
Sbjct: 89  FELSVFWQQYP 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,104
Number of Sequences: 438
Number of extensions: 4157
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)