Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_G05
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 74 9e-14
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 61 7e-10
11_01_0750 - 6315126-6315896,6316371-6316784 51 7e-07
11_02_0012 - 7346282-7347136,7347234-7347593 48 7e-06
01_06_0824 - 32243495-32244319,32244449-32244859 41 8e-04
11_02_0011 - 7337618-7338496,7338596-7338991 41 0.001
05_06_0044 - 25150322-25151260 38 0.010
11_01_0771 + 6453130-6454488 29 4.5
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 28 7.9
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 74.1 bits (174), Expect = 9e-14
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 10/205 (4%)
Frame = -2
Query: 679 KFDERLTSDRDXYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK--GD--QSSLI 512
KFD T D + ++ K+++ P M K + N +++++PY+ GD Q S+
Sbjct: 259 KFDASKTKDGEFHLLDGKSVQAPFMST--SKKQYILSYDNLKVLKLPYQQGGDKRQFSMY 316
Query: 511 VVLPKDKDGITQLQEALK-DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNV 335
++LP+ +DG+ L E L +P+ LE + T LPKFKI D+L ++ +
Sbjct: 317 ILLPEAQDGLWSLAEKLNSEPEFLEKHIPTRQVTVGQFKLPKFKISFGFEASDLLKSLGL 376
Query: 334 NKIFNNDAQITRLL---KGESLSVSEAIQKXXXXXXXXXXXXXXXXXXAVVFMSAVVSQP 164
+ F+++A +T ++ +G++L VS K + SA +++
Sbjct: 377 HLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEVNEEGTEAAAATAAVITLRSAPIAED 436
Query: 163 LVFKANHPFVFFLKGD--GVTLFNG 95
F A+HPF+F ++ D GV LF G
Sbjct: 437 --FVADHPFLFLIQEDMTGVVLFVG 459
Score = 55.2 bits (127), Expect = 5e-08
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Frame = -2
Query: 679 KFDERLTSDRDXYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK--GD--QSSLI 512
KFD T D + ++ ++++ P M R K S+ + +++++PY GD Q S+
Sbjct: 511 KFDVSKTEDGEFHLLDGESVQAPFMSTRK--KQYLSSYDSLKVLKLPYLQGGDKRQFSMY 568
Query: 511 VVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLY-LPKFKIETETNLKDVLSNMN 338
++LP+ +DG+ L E L +P+ +E M V + LPKFKI +L +
Sbjct: 569 ILLPEAQDGLWSLAEKLNSEPEFMEN-HIPMRPVHVGQFKLPKFKISFGFGASGLLKGLG 627
Query: 337 VNKIFNNDAQITRLLK---GESLSVSEAIQKXXXXXXXXXXXXXXXXXXAVVFMSAVVSQ 167
+ +F ++ + ++ ++L VS K A V +S S+
Sbjct: 628 LPLLFGSEVDLIEMVDSPGAQNLFVSSVFHK-----SFIEVNEEGTEATAAVMVSMEHSR 682
Query: 166 P--LVFKANHPFVFFLKGD--GVTLFNG 95
P L F A+HPF+F ++ D GV LF G
Sbjct: 683 PRRLNFVADHPFMFLIREDVTGVILFIG 710
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 61.3 bits (142), Expect = 7e-10
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 10/205 (4%)
Frame = -2
Query: 679 KFDERLTSDRDXYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPY-KGD---QSSLI 512
KFD T D + + K++ P M K S+ + +++++PY KG Q S+
Sbjct: 51 KFDASKTKDGEFRLLDGKSVLAPFMST--SKKQYLSSYDSLKVLKLPYQKGRDLRQFSMY 108
Query: 511 VVLPKDKDGITQLQEALK-DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNV 335
++LP+ +DG+ L L +P+ LE + T LPKFKI D+L + +
Sbjct: 109 ILLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVTVGKFKLPKFKISFGFEASDLLKILGL 168
Query: 334 NKIFNNDAQITRLL---KGESLSVSEAIQKXXXXXXXXXXXXXXXXXXAVVFMSAVVSQP 164
F++ A +T ++ + +L VS K V F SA V+
Sbjct: 169 QLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGTEAAAASAAVVSFRSAPVT-- 226
Query: 163 LVFKANHPFVFFLKGD--GVTLFNG 95
+ F A+HPF+F ++ D GV LF G
Sbjct: 227 VDFVADHPFLFLIREDMTGVVLFIG 251
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 51.2 bits (117), Expect = 7e-07
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Frame = -2
Query: 673 DERLTSDRDXYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYKGDQS----SLIVV 506
D R T+++ Y +++VP + + N ++I++PYK ++ S+ +
Sbjct: 190 DLRRTTEQKFYCLDGTSVEVPFVEYDRTRLFAVHD--NFKVIKLPYKQGKNERKFSMYIF 247
Query: 505 LPKDKDGITQL-QEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNK 329
LP D DG+ +L Q+ +P LE + V + +P FKI + ++KD L +M +
Sbjct: 248 LPDDHDGLFELTQKIFSEPMFLEQHLPTE-KCHVGISVPNFKISFQIDVKDFLKDMGLEL 306
Query: 328 IFNNDAQITRLLKGES----LSVSEAIQKXXXXXXXXXXXXXXXXXXAVVFMSAVVSQPL 161
F +A+ + ++K + L +S+ + K +S + +PL
Sbjct: 307 PFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLEVDQKGIEE--------TSVSMGLGKPL 358
Query: 160 V---FKANHPFVFFLKGD--GVTLFNG 95
FKA+HPF F ++ + G +F G
Sbjct: 359 PAQHFKADHPFFFMIREEVSGTVIFMG 385
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 48.0 bits (109), Expect = 7e-06
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 14/208 (6%)
Frame = -2
Query: 664 LTSDRDXYVSKDKTIKV-PMMYKRGDYKYGESAVLNAQLIEIPYKGDQSSLIVVLPKDKD 488
++S D Y+ KV + Y R +G+ + +++ + S+ + LP +D
Sbjct: 194 MSSREDQYIGFYDGFKVLKLPYHRTMKNHGDGGDITPAILKHYGENVGLSMYIFLPDARD 253
Query: 487 GITQLQEALKDPKTLETAQQSMYSTEV---------DLYLPKFKIETETNLKDVLSNMNV 335
G+ L + + + TA S DL +P+FK+ + + +VL M +
Sbjct: 254 GLPALVDKMAVASS-GTASSSFLRDHRPGRRRIKVGDLRVPRFKVSFYSEMNEVLKGMGI 312
Query: 334 NKIFN-NDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXAVVFMSAVVSQPLV 158
F+ ++ ++ GE + V + + + + F+ ++ P+
Sbjct: 313 GAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEEGTEAAAATACTMKFLCLTLTSPVD 372
Query: 157 FKANHPFVFFL---KGDGVTLFNGVFHP 83
F A+HPF FF+ K D V V P
Sbjct: 373 FVADHPFAFFVVEEKSDAVLFAGHVLDP 400
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 41.1 bits (92), Expect = 8e-04
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 23/218 (10%)
Frame = -2
Query: 679 KFDERLTSDRDXYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK----------G 530
KFD R TSD Y+ + P M G ++Y + +++ +PY G
Sbjct: 187 KFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQY-IACRAGYKVLRLPYARGGRGRGRDTG 244
Query: 529 DQSSLIVVLPKDKDGITQ-LQEALKDPKTL-ETAQQSMYSTEVDLYL-PKFKIETETNLK 359
S+ + LP ++ G+ L++ DP L E++ V ++ P+F + +TN
Sbjct: 245 RLFSMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAA 304
Query: 358 DVLSNMNVNKIFNND-AQITRLLKG----ESLSVSEAIQKXXXXXXXXXXXXXXXXXXAV 194
+ L + + F A ++ +++ E + VS + +
Sbjct: 305 ETLRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHESFVEVNEEGTEAAAATAVVM 364
Query: 193 VFMSAVVSQPLV---FKANHPFVFFLKGD--GVTLFNG 95
A S P+ F A+HPF+F +K D GV +F G
Sbjct: 365 TLGCAAPSAPVHVVDFVADHPFMFLIKEDLTGVVVFAG 402
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 40.7 bits (91), Expect = 0.001
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Frame = -2
Query: 520 SLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYST---EV-DLYLPKFKIETETNLKDV 353
S+ + LP ++DG+ L + + + + + T EV DL +P+FK+ + + V
Sbjct: 263 SMYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYSQINGV 322
Query: 352 LSNMNVNKIFN-NDAQITRLL-----KGESLSVSEAIQKXXXXXXXXXXXXXXXXXXAVV 191
L M V F+ +A ++ + +G L V E + +
Sbjct: 323 LQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAASTACTIR 382
Query: 190 FMSAVVSQPLVFKANHPFVFFL--KGDGVTLFNG 95
+S +S P F A+HPF FF+ + G LF G
Sbjct: 383 LLS--MSYPEDFVADHPFAFFVVEETSGAVLFAG 414
>05_06_0044 - 25150322-25151260
Length = 312
Score = 37.5 bits (83), Expect = 0.010
Identities = 43/211 (20%), Positives = 86/211 (40%), Gaps = 17/211 (8%)
Frame = -2
Query: 676 FDERLTSDRDXYVSKDKTIKVPMMYKRGDYKYGESAVLNA-QLIEIPYK------GDQS- 521
F LT + D +VS D ++VP M + + + ++ + Y+ GD+
Sbjct: 94 FFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMYRTGGAAGGDKMF 153
Query: 520 SLIVVLPKDKDGITQLQEAL-KDPKTL--ETAQQSMYSTEVDLYLPKFKIETETNLKDVL 350
++ + LP D+DG+ +L L +P T + +L +PKF++ + +L
Sbjct: 154 AMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVGELKIPKFEVSLKVEASRLL 213
Query: 349 SNMNVNKIF----NNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXAVVFMS 182
++ F +N L + +VS + + ++ +
Sbjct: 214 REFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAAGTVGEIMGFA 273
Query: 181 AVVSQPLVFKANHPFVFFL--KGDGVTLFNG 95
Q + F A+HPF+FF+ + G+ +F G
Sbjct: 274 MPDDQIVDFVADHPFLFFIVEEVSGLVVFAG 304
>11_01_0771 + 6453130-6454488
Length = 452
Score = 28.7 bits (61), Expect = 4.5
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 7/139 (5%)
Frame = -2
Query: 520 SLIVVLPKDKDGITQLQEALKD-PKTLETAQQSMYSTEV-DLYLPKFKIETETNLKDVLS 347
++ + LP +DG+ L E + P L + + V + +PKFK+ ++ L
Sbjct: 295 AMAIFLPDARDGLRGLVERMASRPGFLHEHMPAAWPVPVGEFRVPKFKVSCGGSVVGALE 354
Query: 346 NMNVNKIFNND-AQITRLLK----GESLSVSEAIQKXXXXXXXXXXXXXXXXXXAVVFMS 182
+ + F+ + A ++ +++ G L V + IQ + S
Sbjct: 355 QLGLRLPFSPELADLSDMVEDDGSGWPLFVGD-IQHKAVIEVNEEGTVAAAATMTRMLPS 413
Query: 181 AVVSQPLVFKANHPFVFFL 125
V P+ F A HPF +F+
Sbjct: 414 GVPPPPVDFVAEHPFAYFI 432
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 451 KTLETAQQSMYSTEVDLYLP-KFKIETETNL 362
K +E A Q +YSTEV+L+ F +ET+T L
Sbjct: 809 KGMEEADQKIYSTEVNLHSQYYFYMETQTAL 839
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,457,540
Number of Sequences: 37544
Number of extensions: 260902
Number of successful extensions: 519
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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