Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G04
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X51593-1|CAA35942.1| 1085|Homo sapiens embryonic myosin heavy ch...    31   4.2  
X15696-1|CAA33731.1| 1085|Homo sapiens protein ( Human muscle mR...    31   4.2  
X13988-1|CAA32167.1| 1940|Homo sapiens protein ( Human mRNA for ...    31   4.2  
X13100-1|CAA31492.1| 1167|Homo sapiens myosin heavy chain (1167 ...    31   4.2  
AY517555-1|AAT44528.1|  941|Homo sapiens hypothetical rhabdomyos...    31   4.2  

>X51593-1|CAA35942.1| 1085|Homo sapiens embryonic myosin heavy chain
            (1085 AA) protein.
          Length = 1085

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 602  EDRADVAESNLSLIRAKHRTFVTTSTV 522
            E+RAD+AES ++ +RAK R F ++  V
Sbjct: 1053 EERADIAESQVNKLRAKTRDFTSSRMV 1079


>X15696-1|CAA33731.1| 1085|Homo sapiens protein ( Human muscle mRNA
            for embryonic myosin heavy chain (SMHCE). ).
          Length = 1085

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 602  EDRADVAESNLSLIRAKHRTFVTTSTV 522
            E+RAD+AES ++ +RAK R F ++  V
Sbjct: 1053 EERADIAESQVNKLRAKTRDFTSSRMV 1079


>X13988-1|CAA32167.1| 1940|Homo sapiens protein ( Human mRNA for
            embryonic myosin heavy chain. ).
          Length = 1940

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 602  EDRADVAESNLSLIRAKHRTFVTTSTV 522
            E+RAD+AES ++ +RAK R F ++  V
Sbjct: 1908 EERADIAESQVNKLRAKTRDFTSSRMV 1934


>X13100-1|CAA31492.1| 1167|Homo sapiens myosin heavy chain (1167 AA)
            protein.
          Length = 1167

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 602  EDRADVAESNLSLIRAKHRTFVTTSTV 522
            E+RAD+AES ++ +RAK R F ++  V
Sbjct: 1135 EERADIAESQVNKLRAKTRDFTSSRMV 1161


>AY517555-1|AAT44528.1|  941|Homo sapiens hypothetical
           rhabdomyosarcoma antigen MU-RMS-40.3 protein.
          Length = 941

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 602 EDRADVAESNLSLIRAKHRTFVTTSTV 522
           E+RAD+AES ++ +RAK R F ++  V
Sbjct: 909 EERADIAESQVNKLRAKTRDFTSSRMV 935


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,235,705
Number of Sequences: 237096
Number of extensions: 1496137
Number of successful extensions: 3243
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3243
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)