Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G04
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X62591-1|CAA44476.1|  477|Drosophila melanogaster miniparamyosin...    68   9e-12
X62590-1|CAA44475.1|  879|Drosophila melanogaster standard param...    68   9e-12
X58722-1|CAA41557.1|  878|Drosophila melanogaster paramyosin pro...    68   9e-12
AE014296-1516|AAN11995.1|  640|Drosophila melanogaster CG5939-PD...    68   9e-12
AE014296-1515|AAF50371.2|  640|Drosophila melanogaster CG5939-PC...    68   9e-12
AE014296-1514|AAN11994.1|  879|Drosophila melanogaster CG5939-PB...    68   9e-12
AE014296-1513|AAF50370.1|  879|Drosophila melanogaster CG5939-PA...    68   9e-12

>X62591-1|CAA44476.1|  477|Drosophila melanogaster miniparamyosin
           protein.
          Length = 477

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -3

Query: 602 EDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 477
           EDRAD AES+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 435 EDRADTAESSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 476


>X62590-1|CAA44475.1|  879|Drosophila melanogaster standard
           paramyosin protein.
          Length = 879

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -3

Query: 602 EDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 477
           EDRAD AES+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 837 EDRADTAESSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 878


>X58722-1|CAA41557.1|  878|Drosophila melanogaster paramyosin
           protein.
          Length = 878

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -3

Query: 602 EDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 477
           EDRAD AES+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 836 EDRADTAESSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 877


>AE014296-1516|AAN11995.1|  640|Drosophila melanogaster CG5939-PD,
           isoform D protein.
          Length = 640

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -3

Query: 602 EDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 477
           EDRAD AES+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 598 EDRADTAESSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 639


>AE014296-1515|AAF50371.2|  640|Drosophila melanogaster CG5939-PC,
           isoform C protein.
          Length = 640

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -3

Query: 602 EDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 477
           EDRAD AES+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 598 EDRADTAESSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 639


>AE014296-1514|AAN11994.1|  879|Drosophila melanogaster CG5939-PB,
           isoform B protein.
          Length = 879

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -3

Query: 602 EDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 477
           EDRAD AES+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 837 EDRADTAESSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 878


>AE014296-1513|AAF50370.1|  879|Drosophila melanogaster CG5939-PA,
           isoform A protein.
          Length = 879

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -3

Query: 602 EDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 477
           EDRAD AES+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 837 EDRADTAESSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 878


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,690,714
Number of Sequences: 53049
Number of extensions: 471205
Number of successful extensions: 1315
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)