Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_G02
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2V4K0 Cluster: Uncharacterized protein At1g29890.2; n=...    38   0.25 
UniRef50_Q6FQR7 Cluster: Similar to sp|P53075 Saccharomyces cere...    36   0.77 
UniRef50_Q8IAX7 Cluster: Putative uncharacterized protein MAL8P1...    35   1.8  
UniRef50_A4VEV1 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_A4M9J4 Cluster: NADH/Ubiquinone/plastoquinone; n=1; Pet...    34   4.1  
UniRef50_Q8I1P2 Cluster: Putative uncharacterized protein PFD094...    33   7.1  
UniRef50_A3IE46 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_Q2V4K0 Cluster: Uncharacterized protein At1g29890.2; n=1;
           Arabidopsis thaliana|Rep: Uncharacterized protein
           At1g29890.2 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 584

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = -1

Query: 353 KYLSNS*KSETLKLMTIKISFSIEKVDTLK---RFG*ICIYIFICNRLSLFALSTK 195
           K+ S+  K+  ++ +T++ SF +E   TL+    FG I +Y +IC+R SL   S K
Sbjct: 81  KFYSSPIKTNLIRFLTLEDSFLLENRATLRAMAEFGAILLYFYICDRTSLIGQSQK 136


>UniRef50_Q6FQR7 Cluster: Similar to sp|P53075 Saccharomyces
           cerevisiae YGL228w SHE10; n=1; Candida glabrata|Rep:
           Similar to sp|P53075 Saccharomyces cerevisiae YGL228w
           SHE10 - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 556

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = -2

Query: 655 FL*FAATVFFCIGYCCFFLIREKIPSLFKYCYGKQLKYGSQFLITNFDFVENNIVSEL*L 476
           FL F ATV+F + Y C   +R + P L   C+  Q    + +L+ N    +N++  +L +
Sbjct: 7   FLLFLATVYFGLKYACESPLRAQYPQLQLACHYSQPALWNDYLLKNSPAYKNSVHPQLVV 66

Query: 475 VRPKH 461
            + K+
Sbjct: 67  AKGKY 71


>UniRef50_Q8IAX7 Cluster: Putative uncharacterized protein
           MAL8P1.93; n=2; Plasmodium|Rep: Putative uncharacterized
           protein MAL8P1.93 - Plasmodium falciparum (isolate 3D7)
          Length = 234

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 19/58 (32%), Positives = 34/58 (58%)
 Frame = -3

Query: 312 YDHKDIIFNRKSGYIEKIWLNLYIYFYL*SFVFVCIIY*MKNKYNYVDYLHFICLQFY 139
           Y+HK++  N     I+ I++ +YIY Y+  ++++CIIY        +D   FI L+F+
Sbjct: 190 YEHKNVFVN-----IDIIYIYIYIYIYI--YIYICIIY-------ILDIFFFILLKFF 233


>UniRef50_A4VEV1 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 208

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +2

Query: 209 QTKTNDYK*KYIYKFNQIFSMYPLFLLKMISLWS*ALVFQIFKNY*GIFYELFRYYTFLC 388
           +TK  ++K KY  K  + F +   FLL+ + LW   + F  + N   +F  LF Y+  +C
Sbjct: 22  KTKHLNFKIKYNNKLVE-FCIQSFFLLQKLELWKYFMQFNFYLN--SLFLLLFPYFLLIC 78

Query: 389 L 391
           L
Sbjct: 79  L 79


>UniRef50_A4M9J4 Cluster: NADH/Ubiquinone/plastoquinone; n=1;
           Petrotoga mobilis SJ95|Rep:
           NADH/Ubiquinone/plastoquinone - Petrotoga mobilis SJ95
          Length = 476

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = +2

Query: 281 FLLKMISLWS*ALVFQIFKNY*GIFYELFRYYTFLCLKFEISYNL*SYYIMLKLV*FLCL 460
           FLL + +L+S    F+I+KNY  IF+ L+   T     F +S +  + Y+ L+L   L  
Sbjct: 67  FLLILFNLFSLITFFRIYKNYDHIFFTLWLLLTGSINGFFMSRDFFNIYVHLELASILTF 126

Query: 461 ML 466
           +L
Sbjct: 127 LL 128


>UniRef50_Q8I1P2 Cluster: Putative uncharacterized protein PFD0945c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFD0945c - Plasmodium falciparum
           (isolate 3D7)
          Length = 536

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = +1

Query: 415 MKLLYNVKISLILMFNALASLIIILKLYYFRQNQNL*LKIDYRILIVSHNNI*IRMVFFL 594
           + +LYN  I  I  FN    +II L +Y F+  +    K+ Y I ++S+NNI +  + F+
Sbjct: 400 LNILYNT-IFFIYSFNIFIPIIIYLTIY-FKTKKIPPFKLIYLISLLSYNNIMLLPIIFI 457


>UniRef50_A3IE46 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. B14905|Rep: Putative uncharacterized
           protein - Bacillus sp. B14905
          Length = 255

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = -1

Query: 674 YDIVS*FF--IICGYCIFLYR--ILLFLPDKRKNTILIQILL 561
           YDI   FF  +I  +C FL    I L+L +K+KNTIL+ +L+
Sbjct: 111 YDIPEQFFYVLIVPFCYFLLTLFITLYLYNKQKNTILLNLLI 152


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,190,087
Number of Sequences: 1657284
Number of extensions: 12025269
Number of successful extensions: 24493
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24361
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)