Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F18
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   5.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.5  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.3  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 354 EYKFSVDQLMELAGLSVASAIAKVFPPSTVD 262
           EY  S++ L+ L   +V+S+ + +  PST D
Sbjct: 109 EYIRSLEDLLALDESTVSSSTSSIPSPSTTD 139


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 367 GSFH*IQV*CRSTYGTCWPECC*CHCQGL 281
           G +  +   C +   TCW EC    C+ L
Sbjct: 869 GEYKCVTCKCENGKPTCWRECDKATCEKL 897


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 277 WEDLGNGTSNTQASKFHKLID 339
           WE L   T  ++ SK  +L+D
Sbjct: 105 WESLIEVTKTSETSKLQQLVD 125


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 51  QFVPDQDXVEFLNYISSIYQLAEIF 125
           Q+V  Q    F + + S++ L+EIF
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIF 386


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
 Frame = -2

Query: 354 EYKFSVDQLMELAGLSVASAIAKVFPPSTVDIPSGWD-VEKGPGEGRALKPALLISLSAP 178
           EY  S+  +++ A   V     +V PP     P G   V   PG+ + +           
Sbjct: 60  EYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPGKTKMIAHL----KDKK 115

Query: 177 KLCAKPEFLRNTKHY--LGGRFLPTDILKKYNLEI 79
           K+ AK  + +    Y  LG R+L  D L  ++ EI
Sbjct: 116 KIRAKKRWSQCMYMYFLLGFRYLVNDELSAHSKEI 150


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
 Frame = -2

Query: 354 EYKFSVDQLMELAGLSVASAIAKVFPPSTVDIPSGWD-VEKGPGEGRALKPALLISLSAP 178
           EY  S+  +++ A   V     +V PP     P G   V   PG+ + +           
Sbjct: 374 EYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPGKTKMIAHL----KDKK 429

Query: 177 KLCAKPEFLRNTKHY--LGGRFLPTDILKKYNLEI 79
           K+ AK  + +    Y  LG R+L  D L  ++ EI
Sbjct: 430 KIRAKKRWSQCMYMYFLLGFRYLVNDELSAHSKEI 464


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 46  FYNLFLIRXLWNF 84
           F+N+FLI   +NF
Sbjct: 414 FFNIFLITPFYNF 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,097
Number of Sequences: 336
Number of extensions: 3224
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)