Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F18
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0182 - 11552540-11552606,11552692-11552787,11553458-115535...    83   3e-16
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009...    28   6.2  
03_01_0563 + 4169144-4169516,4170362-4170648,4171339-4171576,417...    28   6.2  
04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986...    28   8.1  
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557...    28   8.1  

>10_06_0182 -
           11552540-11552606,11552692-11552787,11553458-11553528,
           11553660-11553764,11554149-11554239,11554331-11554381,
           11554478-11554566,11554667-11554909,11555027-11555190,
           11555883-11555988,11556075-11556242,11557456-11557494,
           11557582-11557713
          Length = 473

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 43/97 (44%), Positives = 54/97 (55%)
 Frame = -2

Query: 336 DQLMELAGLSVASAIAKVFPPSTVDIPSGWDVEKGPGEGRALKPALLISLSAPKLCAKPE 157
           D +  L  LS     AK     +VDIPSGW VE+G   G   KP +L+SL+APKLCAK  
Sbjct: 157 DLINRLVSLSAIDNSAKRPAIVSVDIPSGWHVEEGDINGGGFKPDMLVSLTAPKLCAKK- 215

Query: 156 FLRNTKHYLGGRFLPTDILKKYNLEIPQXPDQEQIVK 46
                 H+LGGRF+P  I+ KY L +P  P     V+
Sbjct: 216 -FTGPHHFLGGRFVPPPIVSKYKLHLPPYPGTSMCVR 251



 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 26/54 (48%), Positives = 37/54 (68%)
 Frame = -2

Query: 441 MTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVF 280
           +++S +       +L Q EAA +D+ L     FSVDQLMELAGLSVA+A+A+V+
Sbjct: 6   VSASASASGEEVTHLAQREAAEIDEQLMGPLGFSVDQLMELAGLSVAAAVAEVY 59


>03_06_0198 -
           32299480-32299643,32300084-32300126,32300843-32300929,
           32301063-32301098,32301187-32301295,32301408-32301499,
           32302029-32302115,32303887-32304222
          Length = 317

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 538 DRYFGSKCQFYLIKSYVRVTYVL 606
           DRYFGS C+  LI ++ +  Y+L
Sbjct: 203 DRYFGSVCELDLIFNFHKAYYIL 225


>03_01_0563 +
           4169144-4169516,4170362-4170648,4171339-4171576,
           4172473-4172796,4172914-4172999,4173124-4173231,
           4173315-4173619,4173733-4173960,4174109-4174877
          Length = 905

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 327 MELAGLSVASAIAKVFPPSTVDIPSGWDVEKG----PGE--GRALKPALLISLSAPKLCA 166
           MEL GL+ A+A A V PP+      GW   +     PGE  GR       IS   P+L A
Sbjct: 1   MELTGLTRAAAAATVTPPAP---RRGWGELRFAPLLPGERHGRRKVVVAAISEEVPRLAA 57

Query: 165 KP 160
            P
Sbjct: 58  SP 59


>04_04_1154 - 31297628-31298020,31298150-31298300,31298389-31298620,
            31298700-31298910,31299137-31299255,31299341-31299415,
            31299991-31300189,31300258-31300664,31300775-31300839,
            31300967-31301011,31301449-31301520,31301597-31301671,
            31301912-31301983,31302178-31302249,31302525-31302596,
            31302880-31302951,31303056-31303127,31304064-31304135,
            31304375-31304561,31304686-31304815
          Length = 930

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
 Frame = -2

Query: 477  ILRVAKLYNIGTMTSSVNQCNTVTRYLNQSEAA--ALDQDLFTEYKFSVDQLMELAGLSV 304
            ++RVA L   G+          V+     ++    A      TE++  V          V
Sbjct: 829  VIRVALLCTQGSPHKRPPMSKVVSMLTGDADITEDAAKPSYITEWQIKVGSCHHTGSSQV 888

Query: 303  ASAIAKVFPPSTVDIPSGWDVEKGPGEGRALKPALLIS 190
             SA     PPS+ D  +G    +G GEG  L P+ L +
Sbjct: 889  GSAST---PPSSGDGGAGQASSQGAGEGSPLTPSPLFT 923


>03_05_0434 +
           24252994-24253449,24254791-24254877,24255450-24255748,
           24256146-24256383,24256907-24257441,24257527-24257729,
           24258311-24258520
          Length = 675

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +3

Query: 30  IFNKXILQFVPDQDXVEFLNYISSIYQLAEIFLPNNVWCSLRTLVWR 170
           +F    L+FVP Q+   ++   S  + +  I   +  W  +  L WR
Sbjct: 323 VFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLSWR 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,105,333
Number of Sequences: 37544
Number of extensions: 339353
Number of successful extensions: 746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)