Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_F18
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100934-1|AAI00935.1| 288|Homo sapiens apolipoprotein A-I bind... 79 2e-14
BC100933-1|AAI00934.1| 288|Homo sapiens apolipoprotein A-I bind... 79 2e-14
BC100931-1|AAI00932.1| 288|Homo sapiens apolipoprotein A-I bind... 79 2e-14
BC056917-1|AAH56917.1| 260|Homo sapiens APOA1BP protein protein. 79 2e-14
AL365181-7|CAI13051.1| 288|Homo sapiens apolipoprotein A-I bind... 79 2e-14
AL365181-6|CAI13050.1| 260|Homo sapiens apolipoprotein A-I bind... 79 2e-14
AL365181-5|CAI13049.1| 245|Homo sapiens apolipoprotein A-I bind... 79 2e-14
AJ315849-1|CAC86580.1| 288|Homo sapiens apoA-I binding protein ... 79 2e-14
BC100932-1|AAI00933.1| 185|Homo sapiens APOA1BP protein protein. 77 6e-14
BC020948-1|AAH20948.1| 254|Homo sapiens FLJ44968 protein protein. 41 0.004
AK128532-1|BAC87484.1| 200|Homo sapiens protein ( Homo sapiens ... 31 5.2
AK055432-1|BAB70921.1| 295|Homo sapiens protein ( Homo sapiens ... 30 6.9
>BC100934-1|AAI00935.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 78.6 bits (185), Expect = 2e-14
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 453 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 274
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 273 STVD-IPSGWDVEKGPG 226
+++ P V GPG
Sbjct: 102 TSMSRSPPTVLVICGPG 118
Score = 77.0 bits (181), Expect = 6e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = -2
Query: 279 PPSTVDIPSGWDVEKGPGEGRALKPALLISLSAPKLCAKPEFLRNTKHYLGGRFLPTDIL 100
P +++DIPSGWDVEKG G ++P LLISL+APK A HYLGGRF+P +
Sbjct: 213 PIASIDIPSGWDVEKGNAGG--IQPDLLISLTAPKKSATQ--FTGRYHYLGGRFVPPALE 268
Query: 99 KKYNLEIPQXPDQEQIVK 46
KKY L +P PD E + +
Sbjct: 269 KKYQLNLPPYPDTECVYR 286
>BC100933-1|AAI00934.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 78.6 bits (185), Expect = 2e-14
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 453 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 274
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 273 STVD-IPSGWDVEKGPG 226
+++ P V GPG
Sbjct: 102 TSMSRSPPTVLVICGPG 118
Score = 77.0 bits (181), Expect = 6e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = -2
Query: 279 PPSTVDIPSGWDVEKGPGEGRALKPALLISLSAPKLCAKPEFLRNTKHYLGGRFLPTDIL 100
P +++DIPSGWDVEKG G ++P LLISL+APK A HYLGGRF+P +
Sbjct: 213 PIASIDIPSGWDVEKGNAGG--IQPDLLISLTAPKKSATQ--FTGRYHYLGGRFVPPALE 268
Query: 99 KKYNLEIPQXPDQEQIVK 46
KKY L +P PD E + +
Sbjct: 269 KKYQLNLPPYPDTECVYR 286
>BC100931-1|AAI00932.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 78.6 bits (185), Expect = 2e-14
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 453 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 274
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 273 STVD-IPSGWDVEKGPG 226
+++ P V GPG
Sbjct: 102 TSMSRSPPTVLVICGPG 118
Score = 77.0 bits (181), Expect = 6e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = -2
Query: 279 PPSTVDIPSGWDVEKGPGEGRALKPALLISLSAPKLCAKPEFLRNTKHYLGGRFLPTDIL 100
P +++DIPSGWDVEKG G ++P LLISL+APK A HYLGGRF+P +
Sbjct: 213 PIASIDIPSGWDVEKGNAGG--IQPDLLISLTAPKKSATQ--FTGRYHYLGGRFVPPALE 268
Query: 99 KKYNLEIPQXPDQEQIVK 46
KKY L +P PD E + +
Sbjct: 269 KKYQLNLPPYPDTECVYR 286
>BC056917-1|AAH56917.1| 260|Homo sapiens APOA1BP protein protein.
Length = 260
Score = 78.6 bits (185), Expect = 2e-14
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 453 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 274
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 273 STVD-IPSGWDVEKGPG 226
+++ P V GPG
Sbjct: 102 TSMSRSPPTVLVICGPG 118
>AL365181-7|CAI13051.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 78.6 bits (185), Expect = 2e-14
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 453 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 274
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 273 STVD-IPSGWDVEKGPG 226
+++ P V GPG
Sbjct: 102 TSMSRSPPTVLVICGPG 118
Score = 77.0 bits (181), Expect = 6e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = -2
Query: 279 PPSTVDIPSGWDVEKGPGEGRALKPALLISLSAPKLCAKPEFLRNTKHYLGGRFLPTDIL 100
P +++DIPSGWDVEKG G ++P LLISL+APK A HYLGGRF+P +
Sbjct: 213 PIASIDIPSGWDVEKGNAGG--IQPDLLISLTAPKKSATQ--FTGRYHYLGGRFVPPALE 268
Query: 99 KKYNLEIPQXPDQEQIVK 46
KKY L +P PD E + +
Sbjct: 269 KKYQLNLPPYPDTECVYR 286
>AL365181-6|CAI13050.1| 260|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 260
Score = 78.6 bits (185), Expect = 2e-14
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 453 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 274
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 273 STVD-IPSGWDVEKGPG 226
+++ P V GPG
Sbjct: 102 TSMSRSPPTVLVICGPG 118
>AL365181-5|CAI13049.1| 245|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 245
Score = 78.6 bits (185), Expect = 2e-14
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 453 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 274
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 273 STVD-IPSGWDVEKGPG 226
+++ P V GPG
Sbjct: 102 TSMSRSPPTVLVICGPG 118
>AJ315849-1|CAC86580.1| 288|Homo sapiens apoA-I binding protein
protein.
Length = 288
Score = 78.6 bits (185), Expect = 2e-14
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 453 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 274
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 273 STVD-IPSGWDVEKGPG 226
+++ P V GPG
Sbjct: 102 TSMSRSPPTVLVICGPG 118
Score = 77.0 bits (181), Expect = 6e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = -2
Query: 279 PPSTVDIPSGWDVEKGPGEGRALKPALLISLSAPKLCAKPEFLRNTKHYLGGRFLPTDIL 100
P +++DIPSGWDVEKG G ++P LLISL+APK A HYLGGRF+P +
Sbjct: 213 PIASIDIPSGWDVEKGNAGG--IQPDLLISLTAPKKSATQ--FTGRYHYLGGRFVPPALE 268
Query: 99 KKYNLEIPQXPDQEQIVK 46
KKY L +P PD E + +
Sbjct: 269 KKYQLNLPPYPDTECVYR 286
>BC100932-1|AAI00933.1| 185|Homo sapiens APOA1BP protein protein.
Length = 185
Score = 77.0 bits (181), Expect = 6e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = -2
Query: 279 PPSTVDIPSGWDVEKGPGEGRALKPALLISLSAPKLCAKPEFLRNTKHYLGGRFLPTDIL 100
P +++DIPSGWDVEKG G ++P LLISL+APK A HYLGGRF+P +
Sbjct: 110 PIASIDIPSGWDVEKGNAGG--IQPDLLISLTAPKKSATQ--FTGRYHYLGGRFVPPALE 165
Query: 99 KKYNLEIPQXPDQEQIVK 46
KKY L +P PD E + +
Sbjct: 166 KKYQLNLPPYPDTECVYR 183
>BC020948-1|AAH20948.1| 254|Homo sapiens FLJ44968 protein protein.
Length = 254
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -2
Query: 390 SEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFP 277
+EAAAL+++L +Y+F QL+EL G + A A+ K FP
Sbjct: 79 AEAAALERELLEDYRFGRQQLVELCGHASAVAVTKAFP 116
>AK128532-1|BAC87484.1| 200|Homo sapiens protein ( Homo sapiens
cDNA FLJ46690 fis, clone TRACH3012460. ).
Length = 200
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 318 AGLSVASAIAKVFPPSTVDIPSGWDVEKGPGEGRALKPALLISLSAPKL 172
AG+ A F P T+ + SG+ VE G +G ++ P L +L P+L
Sbjct: 118 AGVKEAPDGRGEFSPCTIPVHSGFPVEGGAPQGPSVFPHLTHTLGDPRL 166
>AK055432-1|BAB70921.1| 295|Homo sapiens protein ( Homo sapiens
cDNA FLJ30870 fis, clone FEBRA2004237. ).
Length = 295
Score = 30.3 bits (65), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 261 IPSGWDVEKGPGEGRALKPALLISLSAP--KLCAKPEFLRNTKHYLGG 124
+PS W+ E G GR P+ AP LC +P+ LR + GG
Sbjct: 1 MPSTWEAEAGGSAGRRAPPSSFRPGDAPVVPLCRQPDVLRRYFNRGGG 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,494,756
Number of Sequences: 237096
Number of extensions: 1928583
Number of successful extensions: 3479
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3467
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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