Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F17
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   6.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   6.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/31 (22%), Positives = 15/31 (48%)
 Frame = -3

Query: 496 NMRLV*IIFCIFYLWNAQLLWFRCENLMDIY 404
           N+R +   +C+   +N  LL+  C     ++
Sbjct: 52  NLRRIYYFYCVSITFNVHLLFLLCSGYFTVH 82


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 300 VVVFYFQSNYLVPQIQYIHYIN 365
           V++ YF +  L+ ++QY HY+N
Sbjct: 184 VILPYFIN--LLMELQYCHYLN 203


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 300 VVVFYFQSNYLVPQIQYIHYIN 365
           V++ YF +  L+ ++QY HY+N
Sbjct: 184 VILPYFIN--LLMELQYCHYLN 203


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 533 LLSLKLLCSNAKFK*N*NLHKCD*SEKWS 619
           ++ LK LC+N   +   N H+C  S+ +S
Sbjct: 149 VVPLKKLCNNGTCEDIGNSHRCHCSDGYS 177


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 573 LNFALLQSNFNDSS*IVIYN 514
           + F   +SNF  S  +++YN
Sbjct: 27  VTFTCTRSNFRSSKLLILYN 46


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 573 LNFALLQSNFNDSS*IVIYN 514
           + F   +SNF  S  +++YN
Sbjct: 45  VTFTCTRSNFRSSKLLILYN 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,781
Number of Sequences: 336
Number of extensions: 3046
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)