Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F16
         (547 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IIP2 Cluster: Putative uncharacterized protein; n=1; ...    33   3.3  
UniRef50_Q55EP6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.3  
UniRef50_Q8IJF8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_Q7RJH7 Cluster: Putative uncharacterized protein PY0328...    33   4.3  
UniRef50_Q9G8Q4 Cluster: Ribosomal protein S3; n=1; Naegleria gr...    32   7.5  
UniRef50_Q95XL3 Cluster: Putative uncharacterized protein; n=1; ...    32   7.5  

>UniRef50_Q8IIP2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2371

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 13/49 (26%), Positives = 29/49 (59%)
 Frame = +1

Query: 343  LSKNSKN*YLQNILEKVLIKKSKYV*IFKFILNSIMGSCNVYINNYLIY 489
            + KN++N  ++N   K ++K+ KY   ++   + ++  CN+Y  N++ Y
Sbjct: 2021 VEKNNEN-KIKNFYTKFMLKRKKYAQFWEMFFHILLNFCNIYELNHIRY 2068


>UniRef50_Q55EP6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 300

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -2

Query: 270 FFKENVLQVTGYYIFHIFVAFYLVFSI 190
           FFK   +   G+YIFHI   FY VFSI
Sbjct: 40  FFKFTKIISIGFYIFHIISCFYWVFSI 66


>UniRef50_Q8IJF8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 310

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
 Frame = -1

Query: 421 FIHIYFF*LILSLKCFVDINFYYFC*VKTITQSILYVXXXXXXXXXXXXXXL*RKRFASN 242
           F+ ++F  + +SL  ++ I F++F   K +  +IL                + +  +   
Sbjct: 196 FLVLFFIYIYISLIIYIYI-FFFFLKDKGVLTTILLSISTLNLNYQFYLDVMKKHVYKKY 254

Query: 241 WLLHFSHFCCVLSSILYPLMN-ISDDTYINIFVNSIKMLKLNN 116
                 + C +L SIL  L+N +  D  +NI +N I  + LNN
Sbjct: 255 EHFEVKYLCNILYSILLRLVNTLHKDDILNIMLNDIMYILLNN 297


>UniRef50_Q7RJH7 Cluster: Putative uncharacterized protein PY03283;
            n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY03283 - Plasmodium yoelii yoelii
          Length = 1236

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
 Frame = +1

Query: 208  KRNKNVKNVITSYLQNVFFKELETTDAAIMCFYCVHTISTVLLF*LSKNSKN*YLQNILE 387
            KR KN  N++ S      F+   T    I C   +H  + +LL   +    N  + NI  
Sbjct: 948  KRTKNCINMLKS--DKDIFENDNTIQTIIFCINILHHCALILLEIQNLYKYNRNINNIY- 1004

Query: 388  KVLIKKSKYV*IF-KFIL-NSIMGSCNVYINNYL 483
             +LI + KY+ ++ K IL N+   +  +YINNY+
Sbjct: 1005 -LLILQLKYIYLYNKDILQNTKNQNFKLYINNYI 1037


>UniRef50_Q9G8Q4 Cluster: Ribosomal protein S3; n=1; Naegleria
           gruberi|Rep: Ribosomal protein S3 - Naegleria gruberi
          Length = 523

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = -1

Query: 244 NWLLHFSHFCCVLSSILYPLMNISDD-TYINIFVNSIKMLKL 122
           N L H+S F C+L +I+Y L NI ++  ++  F++ I+ LKL
Sbjct: 200 NLLKHYS-FICILKNIIYFLFNIKNNYFFLRSFLHYIEKLKL 240


>UniRef50_Q95XL3 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 332

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = -1

Query: 256 RFASNWLLHFSHFCCVLSSILYPLMNISDDTYINIFVNSIKMLKLNN*CRTLRYKK 89
           R  S ++LHFSHF C     +Y + N S +T + I  N ++  +    CR + +KK
Sbjct: 225 RLDSKFILHFSHFQCF---TIYKMFNFSTETAVEIRDNLMRKSEFQR-CR-IYFKK 275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,197,921
Number of Sequences: 1657284
Number of extensions: 7272722
Number of successful extensions: 15617
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15616
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)