Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F14
         (726 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q48574 Cluster: ORFC; n=2; Leptospira interrogans|Rep: ...    37   0.58 
UniRef50_Q4TA56 Cluster: Chromosome undetermined SCAF7448, whole...    36   1.3  
UniRef50_UPI0000D9A547 Cluster: PREDICTED: similar to mucin 4, p...    34   4.1  
UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355; ...    34   4.1  
UniRef50_UPI0000DC03AC Cluster: UPI0000DC03AC related cluster; n...    28   6.4  
UniRef50_Q9Y1Y7 Cluster: Protein tyrosine kinase; n=1; Ephydatia...    33   7.2  
UniRef50_Q4DDC0 Cluster: Putative uncharacterized protein; n=3; ...    33   7.2  
UniRef50_Q6ZSA2 Cluster: CDNA FLJ45698 fis, clone FEBRA2017811; ...    33   7.2  

>UniRef50_Q48574 Cluster: ORFC; n=2; Leptospira interrogans|Rep:
           ORFC - Leptospira interrogans serovar
           Icterohaemorrhagiae
          Length = 85

 Score = 36.7 bits (81), Expect = 0.58
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
 Frame = +1

Query: 436 HQISIHY-KLCYTMNIITTIVHHY---HLKLIISPNEVSNDKLRCT--------SHIHYY 579
           ++I ++Y KL Y   +I  ++  Y   ++  + S N+    +LRC         S + YY
Sbjct: 3   NEICVYYNKLLYDQKVILRLLEFYKSNYIPFLFSENQRRTRQLRCPNNFPFYYYSFLVYY 62

Query: 580 *TNVFDLNTQNNWI 621
            T+ F+  T NNWI
Sbjct: 63  LTDTFEFRTNNNWI 76


>UniRef50_Q4TA56 Cluster: Chromosome undetermined SCAF7448, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7448,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 548

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 452 WILIW*WRYGAIMTTAIICAFVRACVCVC 366
           W+ +W W +  +   A +C +   CVCVC
Sbjct: 325 WVCVWAWAWAWVCVWAWVCVWAWVCVCVC 353


>UniRef50_UPI0000D9A547 Cluster: PREDICTED: similar to mucin 4,
           partial; n=2; Macaca mulatta|Rep: PREDICTED: similar to
           mucin 4, partial - Macaca mulatta
          Length = 496

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 26/99 (26%), Positives = 44/99 (44%)
 Frame = +1

Query: 364 VHTHTHARTNAHIIAVVIMAP*RHHQISIHYKLCYTMNIITTIVHHYHLKLIISPNEVSN 543
           +HT  H   + H+    I  P       + +   +T N ++   HH H   I +PN +++
Sbjct: 188 IHTPNHLADH-HLHHSPITTPNNLADRHLRHSHIHTPNHLSD--HHLHHSPITTPNNLAD 244

Query: 544 DKLRCTSHIHYY*TNVFDLNTQNNWIFYRDGLRXYVICY 660
               C SHIH + T   +L   ++ I   D LR   +C+
Sbjct: 245 ----CHSHIHSHITTPNNLPDHHSHIHIPDDLRDRHLCH 279


>UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355;
           n=1; Homo sapiens|Rep: CDNA FLJ42813 fis, clone
           BRCAN2012355 - Homo sapiens (Human)
          Length = 180

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 718 LYTHIYXCLFSEHTVHLITNNILHTXA---VRLCRISSCFACLDRKHSFSNNECVRYTVV 548
           +YTHI+ C+     +H+ T   +H      + +C  +  + C  RKH +++     YT +
Sbjct: 1   MYTHIHMCICMYTHMHMCTYVCIHIHICVHIYICMYTHRYMC-TRKHMYTHKHMYVYTYI 59

Query: 547 Y 545
           Y
Sbjct: 60  Y 60


>UniRef50_UPI0000DC03AC Cluster: UPI0000DC03AC related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC03AC UniRef100 entry -
           Rattus norvegicus
          Length = 260

 Score = 27.9 bits (59), Expect(2) = 6.4
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 259 HYDIHKLRMTLVL*NTNENKSRANRFNRCFVEK*RVHTHTHARTNAH 399
           H   H   +T +  +T+  +S        +    RVHTHTH  T++H
Sbjct: 68  HTHTHVHTLTHICIHTSHTQSHTCMPVISYSHDTRVHTHTHTHTHSH 114



 Score = 24.2 bits (50), Expect(2) = 6.4
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = +1

Query: 373 HTHARTNAHIIAVVIMAP*RHHQISIH-YKLCYTMNIITTIVH-HYHLKLIISPNEVSND 546
           HTH+ T++HI+         +     H +   +T+    T+ H H H   + +  ++   
Sbjct: 118 HTHSYTHSHILTHSHTVTHTYTHTHTHTHTYSHTLTHSHTVTHTHSHTHTLSAMFQIFPR 177

Query: 547 KLRCTSHIHYY 579
              C  H H Y
Sbjct: 178 IKLCPHHNHTY 188


>UniRef50_Q9Y1Y7 Cluster: Protein tyrosine kinase; n=1; Ephydatia
           fluviatilis|Rep: Protein tyrosine kinase - Ephydatia
           fluviatilis
          Length = 709

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -2

Query: 425 GAIMTTAIICAFVRACVCVCTRHFSTKHLLNRFALLL 315
           G ++  A I A V   VCV T H   KH L R A L+
Sbjct: 290 GTVLAVAFIVALVLGGVCVATLHTRKKHTLRRQATLM 326


>UniRef50_Q4DDC0 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 362

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 400 YVHSYARVYVCARVTSLRNIY*TDSLYFCSHLYFIRLMSFVTCVCHNDCC 251
           +V+    VY C  V    ++Y    +Y C H+Y   L  ++  VC   CC
Sbjct: 275 HVYGCMHVYGCMHVYGCMHVYGCMHVYGCMHVYGCMLCVWLYAVCMAVCC 324


>UniRef50_Q6ZSA2 Cluster: CDNA FLJ45698 fis, clone FEBRA2017811;
           n=3; Homo sapiens|Rep: CDNA FLJ45698 fis, clone
           FEBRA2017811 - Homo sapiens (Human)
          Length = 415

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +1

Query: 364 VHTHTHARTNAHIIAVVIMAP*RHHQISIHYKLC---YTMNIITTIVHHYHLKLIISPNE 534
           +HT+THA T+AHI   V      H  ++IH   C   YT    T +  H H+ +    + 
Sbjct: 105 MHTYTHAHTHAHIHIHV------HIHMNIHTHTCTHIYTCT-YTVVCTHTHMHIYTHMHT 157

Query: 535 VSNDKLRCTSHIHYY 579
            +   +   +H+H Y
Sbjct: 158 HTCIHIHSDTHLHIY 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,872,126
Number of Sequences: 1657284
Number of extensions: 12212540
Number of successful extensions: 28247
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27802
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)