Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F14
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    28   0.34 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   4.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   9.6  

>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 694 LFSEHTVHLITNNILHTXAVRLCRISSCFACLDRKHSFSN 575
           L + H +H +TNNI+H    R  R S+  A LD + +F +
Sbjct: 44  LSTTHQLHRVTNNIVHN---RCNRKSTGLALLDTEKAFDS 80


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 670 LITNNILHTXAVRLCRISSCFACLDRKHSFS 578
           +I   + H     LC I S FAC  +  SFS
Sbjct: 31  IIWTTVTHILCAYLCYIFSKFACKIQIQSFS 61


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 622 ISSCFACLDRKHSFSNNECVRYT 554
           +  C+   D + S S+NECV  T
Sbjct: 113 VQGCWGSNDDQESCSSNECVSTT 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,388
Number of Sequences: 2352
Number of extensions: 13963
Number of successful extensions: 76
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)