Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F14
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81583-6|CAB04674.1|  397|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z71259-1|CAA95789.1|  360|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z81583-6|CAB04674.1|  397|Caenorhabditis elegans Hypothetical
           protein T02G6.6 protein.
          Length = 397

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 187 FKIKRIYTYIETVHFAFVPFNCNNHYDIHKL 279
           F +   + +  T HF+FV F+  N  D HKL
Sbjct: 204 FDLSHFFVWNFTTHFSFVEFSPTNGEDFHKL 234


>Z71259-1|CAA95789.1|  360|Caenorhabditis elegans Hypothetical
           protein F13G3.1 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -3

Query: 697 CLFSEHTVHLITNNI--LHTXAVRLCRISSCFACLDRKHSFSNNECVRYTVVYRLKP 533
           C F +  V ++ +++  LH  +  +CR  + F  +    + SN  C    ++Y + P
Sbjct: 185 CSFEDERVSVLNSHVSHLHNTSPCVCRCGAKFEDVQGALAHSNGPCSHVDMIYNVMP 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,297
Number of Sequences: 27780
Number of extensions: 319512
Number of successful extensions: 745
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)