Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F08
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.58 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.58 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 329 ECNITTARGTTMSLYPKNAFYICFPLVRYNTHK 427
           ECN TTA G T  L    +F   F LV Y+  K
Sbjct: 179 ECNNTTAEGFTYFL-GNMSFAHIFALVEYDIFK 210


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 329 ECNITTARGTTMSLYPKNAFYICFPLVRYNTHK 427
           ECN TTA G T  L    +F   F LV Y+  K
Sbjct: 179 ECNNTTAEGFTYFL-GNMSFAHIFALVEYDIFK 210


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 439 YFIVFHITFILHTNTHADL 495
           + IV  +  +L   THADL
Sbjct: 675 FHIVIGMNLVLQVGTHADL 693


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 356 TTMSLYPKNAFYICF 400
           T + +Y  N FY+CF
Sbjct: 312 TLVVIYTFNLFYLCF 326


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 356 TTMSLYPKNAFYICF 400
           T + +Y  N FY+CF
Sbjct: 268 TLVVIYTFNLFYLCF 282


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 113 QVEVYQYTTYDNTSDFYK 166
           ++E ++ T YD  ++FY+
Sbjct: 5   EMEKFEITDYDLNNEFYR 22


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 392 ICFPLVRYNTHKLRSHISLFFTL 460
           ICF   RY+T  +   + +F  L
Sbjct: 303 ICFKAPRYHTLDITEPVKVFIQL 325


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +2

Query: 341 TTARGTTMSLYPKNAFYICFPLVRYNTHKLRSHIS 445
           T A      + P     +C+ ++  N+H  R +I+
Sbjct: 495 TLAESPIFIIIPVTLTSVCYFMIGLNSHGFRFYIA 529


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,017
Number of Sequences: 336
Number of extensions: 2930
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)