BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_F08
(548 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15150-1|CAA33247.1| 923|Drosophila melanogaster putative recep... 29 4.1
L76559-1|AAB67306.1| 2059|Drosophila melanogaster Mus308 protein. 29 4.1
BT021359-1|AAX33507.1| 2059|Drosophila melanogaster LP14642p pro... 29 4.1
AY071403-1|AAL49025.1| 923|Drosophila melanogaster RE49094p pro... 29 4.1
AE014297-1578|AAF54858.1| 2059|Drosophila melanogaster CG6019-PA... 29 4.1
AE013599-485|AAF59203.1| 923|Drosophila melanogaster CG1389-PA ... 29 4.1
AE014296-3686|AAZ66074.1| 179|Drosophila melanogaster CG33769-P... 28 9.6
>X15150-1|CAA33247.1| 923|Drosophila melanogaster putative receptor
tyrosine kinase protein.
Length = 923
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 363 IVVPLA-VVMLHSLTIIFTDNRSRITLLDLQNNTDA*TQFHLSLLSVYG 220
I+VP+ ++ML SLT NRS + L + ++FHLSL+ G
Sbjct: 404 IIVPICCILMLCSLTFC-RRNRSEVQALQMDAKDAKASEFHLSLMDSSG 451
>L76559-1|AAB67306.1| 2059|Drosophila melanogaster Mus308 protein.
Length = 2059
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 408 SDITHINSEVIFHCFSHYIHPSHKYTRRSFMESFESQQH 524
S+I INSE FS+ ++ +HK +S + + QQH
Sbjct: 47 SEIQEINSEFFRDEFSYEVNQAHKPAEQSVVNVSQVQQH 85
>BT021359-1|AAX33507.1| 2059|Drosophila melanogaster LP14642p
protein.
Length = 2059
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 408 SDITHINSEVIFHCFSHYIHPSHKYTRRSFMESFESQQH 524
S+I INSE FS+ ++ +HK +S + + QQH
Sbjct: 47 SEIQEINSEFFRDEFSYEVNQAHKPAEQSVVNVSQVQQH 85
>AY071403-1|AAL49025.1| 923|Drosophila melanogaster RE49094p
protein.
Length = 923
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 363 IVVPLA-VVMLHSLTIIFTDNRSRITLLDLQNNTDA*TQFHLSLLSVYG 220
I+VP+ ++ML SLT NRS + L + ++FHLSL+ G
Sbjct: 404 IIVPICCILMLCSLTFC-RRNRSEVQALQMDAKDAKASEFHLSLMDSSG 451
>AE014297-1578|AAF54858.1| 2059|Drosophila melanogaster CG6019-PA
protein.
Length = 2059
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 408 SDITHINSEVIFHCFSHYIHPSHKYTRRSFMESFESQQH 524
S+I INSE FS+ ++ +HK +S + + QQH
Sbjct: 47 SEIQEINSEFFRDEFSYEVNQAHKPAEQSVVNVSQVQQH 85
>AE013599-485|AAF59203.1| 923|Drosophila melanogaster CG1389-PA
protein.
Length = 923
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 363 IVVPLA-VVMLHSLTIIFTDNRSRITLLDLQNNTDA*TQFHLSLLSVYG 220
I+VP+ ++ML SLT NRS + L + ++FHLSL+ G
Sbjct: 404 IIVPICCILMLCSLTFC-RRNRSEVQALQMDAKDAKASEFHLSLMDSSG 451
>AE014296-3686|AAZ66074.1| 179|Drosophila melanogaster CG33769-PA
protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 129 STQHMTTLAIFIKMFIISLPKGLKCYHTFVPRTLKAMRDETVFMHLCYFVNLVK 290
S Q + T I + + +L +GLK + +F R KA ++V+ H + L+K
Sbjct: 45 SIQIIKTKVIMDMILVTTLRQGLKAHLSFEFRLTKAKPYQSVYQHDMNYCALIK 98
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,188,045
Number of Sequences: 53049
Number of extensions: 463450
Number of successful extensions: 941
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -