Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_F05
(667 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 23 2.2
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 22 3.9
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 22 3.9
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 5.2
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 22 5.2
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 22 5.2
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.1
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +3
Query: 204 STWPYIK*ELNNSSTSLDLFPRSINF*LHGRSRHQNRHDGREIFDCCVC 350
S P +K + + ++ RS + H H+ H G + F+C C
Sbjct: 121 SVSPEVKDSSRDRPFTCEVCNRSFGY-KHVLQNHERTHTGEKPFECQEC 168
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 169 TYFGFTF*TSDFRANFICNLISFYFI 92
TYFG T + + N CN I +++
Sbjct: 305 TYFGKTGRKTVLKTNKYCNFIILFYL 330
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 167 LFWIYVLNVRFPG*FHL*SYIFLFYMS 87
L WI V + G ++ Y+F F++S
Sbjct: 256 LLWITVTFILLVGDSYIVMYVFFFHLS 282
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 300 RHQNRHDGREIFDCCVCS 353
RH H G + F C +C+
Sbjct: 364 RHLRTHTGEKRFACPICN 381
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 445 PVAIYITQIKGCSTYC*N 498
P+ I ++ +K C +YC N
Sbjct: 272 PLPIVLSIVKNCLSYCFN 289
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 445 PVAIYITQIKGCSTYC*N 498
P+ I ++ +K C +YC N
Sbjct: 272 PLPIVLSIVKNCLSYCFN 289
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 525 SCCKLGLNWFTF 560
S CK+ + WF F
Sbjct: 126 STCKMDITWFPF 137
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 525 SCCKLGLNWFTF 560
S CK+ + WF F
Sbjct: 126 STCKMDITWFPF 137
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 525 SCCKLGLNWFTF 560
S CK+ + WF F
Sbjct: 126 STCKMDITWFPF 137
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 525 SCCKLGLNWFTF 560
S CK+ + WF F
Sbjct: 126 STCKIDITWFPF 137
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 525 SCCKLGLNWFTF 560
S CK+ + WF F
Sbjct: 126 STCKMDITWFPF 137
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,050
Number of Sequences: 336
Number of extensions: 2740
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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