Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_F05
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   3.5  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   4.6  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   4.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   4.6  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   4.6  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   4.6  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   4.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.0  

>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 16  NLNYIHENRWNLNYNS 63
           N NY + N +N NYN+
Sbjct: 88  NYNYSNYNNYNNNYNN 103


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 13  LNLNYIHENRWNLNYNS 63
           L+ N IH N +  NYN+
Sbjct: 84  LSNNTIHNNNYKYNYNN 100


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 13  LNLNYIHENRWNLNYNS 63
           L+ N IH N +  NYN+
Sbjct: 84  LSNNTIHNNNYKYNYNN 100


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 13  LNLNYIHENRWNLNYNS 63
           L+ N IH N +  NYN+
Sbjct: 85  LSNNTIHNNNYKYNYNN 101


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 13  LNLNYIHENRWNLNYNS 63
           L+ N IH N +  NYN+
Sbjct: 85  LSNNTIHNNNYKYNYNN 101


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 13  LNLNYIHENRWNLNYNS 63
           L+ N IH N +  NYN+
Sbjct: 85  LSNNTIHNNNYKYNYNN 101


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 13  LNLNYIHENRWNLNYNS 63
           L+ N IH N +  NYN+
Sbjct: 85  LSNNTIHNNNYKYNYNN 101


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 522 LFFKT*IIISAVGTTTFDLCYVDCHR 445
           +F+   +IISA+G TT  L  + C +
Sbjct: 42  VFYSVLMIISAIGNTTV-LILITCRK 66


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 297 SRHQNRHDGREIFDCCVCS 353
           +RH   H G + + C  CS
Sbjct: 108 TRHYRTHTGEKPYQCEYCS 126



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 300 RHQNRHDGREIFDCCVCS 353
           RH   H G     C VCS
Sbjct: 165 RHMRIHTGERPHKCTVCS 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,694
Number of Sequences: 438
Number of extensions: 2916
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)