Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_E22
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 221 3e-58
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 221 3e-58
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 221 3e-58
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 221 3e-58
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 221 3e-58
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 221 3e-58
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 220 6e-58
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 220 6e-58
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 220 6e-58
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 216 9e-57
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 212 2e-55
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 123 9e-29
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 95 4e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 93 1e-19
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 79 3e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 66 2e-11
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 40 0.001
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 3.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 221 bits (540), Expect = 3e-58
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 249 ITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 221 bits (540), Expect = 3e-58
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 249 ITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 221 bits (540), Expect = 3e-58
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 249 ITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 369 SIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 221 bits (540), Expect = 3e-58
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 205 ITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 264
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 265 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 324
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 325 SIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 221 bits (540), Expect = 3e-58
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 235 ITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 294
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 295 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 354
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 355 SIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 221 bits (540), Expect = 3e-58
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 249 ITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 220 bits (538), Expect = 6e-58
Identities = 103/128 (80%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 249 ITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 220 bits (538), Expect = 6e-58
Identities = 103/128 (80%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 249 ITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 220 bits (538), Expect = 6e-58
Identities = 103/128 (80%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 249 ITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 216 bits (528), Expect = 9e-57
Identities = 103/128 (80%), Positives = 108/128 (84%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
IT+GNERFR PEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYP
Sbjct: 249 ITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 309 GIADRMQKE-ITALAPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 368 SIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 212 bits (517), Expect = 2e-55
Identities = 99/128 (77%), Positives = 105/128 (82%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
ITIGNERFR PE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+P
Sbjct: 248 ITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFP 307
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
GIADRMQKE PERKYSVWIGGSILASLSTFQQMWISK+EYDESGP
Sbjct: 308 GIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 250 GIVHRKCF 227
IVHRKCF
Sbjct: 368 SIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 123 bits (297), Expect = 9e-29
Identities = 57/128 (44%), Positives = 77/128 (60%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
I I N FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+N V+SGGTT++
Sbjct: 247 IEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFK 306
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 251
G DR+ E ER WIGGSI+ASL TF++MW+ K+EY++ G
Sbjct: 307 GFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGA 366
Query: 250 GIVHRKCF 227
+H++ F
Sbjct: 367 SAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 95.1 bits (226), Expect = 4e-20
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
I +G ERF PE LFQP + +E G+ E ++ I D+D R D Y + V+SGGTTMYP
Sbjct: 252 IRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYP 311
Query: 430 GIADRMQKEXXXXXXXXXXXXXXXXPE-----------RKYSVWIGGSILASL--STFQQ 290
G+ R++KE + RK+ V++GG++LA+L Q
Sbjct: 312 GLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQD 371
Query: 289 MWISKEEYDESG 254
W+SK+EY+E G
Sbjct: 372 FWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 93.1 bits (221), Expect = 1e-19
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Frame = -2
Query: 601 GNERFRXPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTM 437
G ER + PE LF +L E + + S D+DIR L++N ++GG ++
Sbjct: 304 GAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSL 363
Query: 436 YPGIADRMQ---KEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEY 266
G +R+ ERKY WIGGSIL SL TFQQMW+SK EY
Sbjct: 364 ILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEY 423
Query: 265 DESGPGIVHRKC 230
DESG IV +KC
Sbjct: 424 DESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/112 (32%), Positives = 65/112 (58%)
Frame = -2
Query: 604 IGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 425
I N RF E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 424 ADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEE 269
A+++++E P R + ++G I+AS STF+ IS ++
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 78.6 bits (185), Expect = 3e-15
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 434
+ +G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 433 PGIADRMQKEXXXXXXXXXXXXXXXXPER----------------KYSVWIGGSILASLS 302
A ++Q++ R +Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 301 TFQQMWISKEEYDESGPGI 245
F Q+ +K EY E GP I
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 430 GIADRMQKE-XXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 254
G +R+++E + W G L L+ + WI+++++DE G
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQTHSWHCGQEL--LTASKVPWINRKDWDERG 380
Query: 253 PGI 245
+
Sbjct: 381 DSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = -2
Query: 610 ITIGNERFRXPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 431
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 430 GIADRMQKE-XXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 254
G +R+++E + W G L L+ + WI+++++DE G
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQTHSWHCGQEL--LTASKVPWINRKDWDERG 380
Query: 253 PGI 245
+
Sbjct: 381 DSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/39 (33%), Positives = 27/39 (69%)
Frame = -2
Query: 520 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 404
++ + KC +D+RK L+ N +++GG + PG+ R+++E
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQE 232
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 533 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 390
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 434 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 336
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -1
Query: 509 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 330
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 329 RWIHPG 312
H G
Sbjct: 487 HGTHHG 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,736,841
Number of Sequences: 27780
Number of extensions: 223086
Number of successful extensions: 670
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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