Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_E21
         (563 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U50072-1|ABP49527.1|  378|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF003383-3|ABO16467.1|  438|Caenorhabditis elegans Cyclophylin p...    28   4.0  
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z66495-3|CAA91270.2|  484|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF016450-9|AAB65987.3|  295|Caenorhabditis elegans Serpentine re...    28   5.3  
Z47357-9|CAI46580.1|  563|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z47357-8|CAA87425.3|  601|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U55368-4|AAA97991.1|  181|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
            C38D4.3 protein.
          Length = 1784

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/80 (26%), Positives = 38/80 (47%)
 Frame = -2

Query: 400  SEDLQYTISDIQHRNYLFSQEQETPVKEKKLTAGIFVLPSRHKQTEDDYRNRPDYPESPL 221
            ++DL+    ++     + S+E +   KE + T        R ++ E +   +P  PE P 
Sbjct: 1256 ADDLESKSEEVNEEEVVESEEVQQDAKEPEKTE------KRQEEPEPEVM-QPVIPEEPQ 1308

Query: 220  PISQPSTDKLIEILNEDPNV 161
              S  S+ KL E L E+P++
Sbjct: 1309 NESLESSIKLQEELQEEPDI 1328


>U50072-1|ABP49527.1|  378|Caenorhabditis elegans Hypothetical
           protein K06B9.2 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 184 ILNEDPNVHYMDGICEDSSRTPYH 113
           I N    +++MD +C  SSR PYH
Sbjct: 223 IANHFFTMNFMDRVCSPSSRLPYH 246


>AF003383-3|ABO16467.1|  438|Caenorhabditis elegans Cyclophylin
           protein 17 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
 Frame = -2

Query: 352 LFSQEQETPVKEKKLTA----GIFVLPSR-HKQTEDDYRNRPDYPESPLPISQPSTDKLI 188
           L  + +ET  +E ++T      + V  S+ HK   ++    P +   P+PI+ PST    
Sbjct: 344 LEKETEETTPEEPEITTVPEEDVVVTKSKVHKTNTEESTESPKHTFKPIPITVPSTGP-- 401

Query: 187 EILNEDPN 164
           E+ ++ PN
Sbjct: 402 ELSHQKPN 409


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 292  VLPSRHKQTEDDYRNRPDYPESPLPISQPSTDKLIEIL 179
            V+PS     E D+ N P     P+P+ +P+T  L E++
Sbjct: 1515 VVPSEPSLLELDFTNDPKVIHVPIPLMEPATMYLEEMV 1552


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 292  VLPSRHKQTEDDYRNRPDYPESPLPISQPSTDKLIEIL 179
            V+PS     E D+ N P     P+P+ +P+T  L E++
Sbjct: 1515 VVPSEPSLLELDFTNDPKVIHVPIPLMEPATMYLEEMV 1552


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 292  VLPSRHKQTEDDYRNRPDYPESPLPISQPSTDKLIEIL 179
            V+PS     E D+ N P     P+P+ +P+T  L E++
Sbjct: 1515 VVPSEPSLLELDFTNDPKVIHVPIPLMEPATMYLEEMV 1552


>Z66495-3|CAA91270.2|  484|Caenorhabditis elegans Hypothetical
           protein C36A4.4 protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 184 ILNEDPNVHYMDGICEDSSRTPYH 113
           I N    + +MD +C  SSR PYH
Sbjct: 329 IANHFFTMDFMDRVCSPSSRLPYH 352


>AF016450-9|AAB65987.3|  295|Caenorhabditis elegans Serpentine
           receptor, class t protein69 protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 460 LAALVIVWIAYCMFIRERAKSEDLQYTI 377
           LA L+I+++ YC  I+  AKS  ++ +I
Sbjct: 177 LAYLIIIFLIYCKNIKSTAKSRKIEISI 204


>Z47357-9|CAI46580.1|  563|Caenorhabditis elegans Hypothetical
           protein ZK1128.6b protein.
          Length = 563

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 391 LQYTISDIQHRNYLFSQEQETPVKEKKLT-AGIFVLPSRHKQTEDDYRNRP 242
           L+  IS   H         + P+ +  L  AG++V PS  K ++ DY  RP
Sbjct: 396 LEVNISPSLHSGTPLDVSVKAPLAKDVLNLAGVYVPPSFDKLSDADYSTRP 446


>Z47357-8|CAA87425.3|  601|Caenorhabditis elegans Hypothetical
           protein ZK1128.6a protein.
          Length = 601

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 391 LQYTISDIQHRNYLFSQEQETPVKEKKLT-AGIFVLPSRHKQTEDDYRNRP 242
           L+  IS   H         + P+ +  L  AG++V PS  K ++ DY  RP
Sbjct: 434 LEVNISPSLHSGTPLDVSVKAPLAKDVLNLAGVYVPPSFDKLSDADYSTRP 484


>U55368-4|AAA97991.1|  181|Caenorhabditis elegans Hypothetical
           protein T08H10.4 protein.
          Length = 181

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 505 IXMSFYIGGFICALVLAALVIVWIAYCMFIRERAK 401
           + M F + GF+ A+++++  I W +   F   R+K
Sbjct: 34  VDMFFVLSGFLMAMIISSKPITWNSVYQFYFRRSK 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,395,727
Number of Sequences: 27780
Number of extensions: 258453
Number of successful extensions: 767
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)