Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_E20
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060817-1|AAL28365.1|  721|Drosophila melanogaster GH28787p pro...    29   6.4  
AF153209-1|AAD47349.1|  721|Drosophila melanogaster origin recog...    29   6.4  
AF152093-1|AAD32712.2|  721|Drosophila melanogaster LATHEO protein.    29   6.4  
AF139062-1|AAD39472.1|  721|Drosophila melanogaster origin recog...    29   6.4  
AE013599-1658|AAM68599.1|  721|Drosophila melanogaster CG4088-PB...    29   6.4  
AE013599-1657|AAF58411.1|  721|Drosophila melanogaster CG4088-PA...    29   6.4  

>AY060817-1|AAL28365.1|  721|Drosophila melanogaster GH28787p
           protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 230 LAENQFLKKKMIMLLKNCNIEFVIF 156
           L ++ +LKKK+  LL++C + F++F
Sbjct: 379 LTDDDYLKKKLPQLLRDCLLHFLLF 403


>AF153209-1|AAD47349.1|  721|Drosophila melanogaster origin
           recognition complex subunit protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 230 LAENQFLKKKMIMLLKNCNIEFVIF 156
           L ++ +LKKK+  LL++C + F++F
Sbjct: 379 LTDDDYLKKKLPQLLRDCLLHFLLF 403


>AF152093-1|AAD32712.2|  721|Drosophila melanogaster LATHEO protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 230 LAENQFLKKKMIMLLKNCNIEFVIF 156
           L ++ +LKKK+  LL++C + F++F
Sbjct: 379 LTDDDYLKKKLPQLLRDCLLHFLLF 403


>AF139062-1|AAD39472.1|  721|Drosophila melanogaster origin
           recognition complex subunit3 protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 230 LAENQFLKKKMIMLLKNCNIEFVIF 156
           L ++ +LKKK+  LL++C + F++F
Sbjct: 379 LTDDDYLKKKLPQLLRDCLLHFLLF 403


>AE013599-1658|AAM68599.1|  721|Drosophila melanogaster CG4088-PB,
           isoform B protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 230 LAENQFLKKKMIMLLKNCNIEFVIF 156
           L ++ +LKKK+  LL++C + F++F
Sbjct: 379 LTDDDYLKKKLPQLLRDCLLHFLLF 403


>AE013599-1657|AAF58411.1|  721|Drosophila melanogaster CG4088-PA,
           isoform A protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 230 LAENQFLKKKMIMLLKNCNIEFVIF 156
           L ++ +LKKK+  LL++C + F++F
Sbjct: 379 LTDDDYLKKKLPQLLRDCLLHFLLF 403


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,763,048
Number of Sequences: 53049
Number of extensions: 455729
Number of successful extensions: 888
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)