Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_E20
         (725 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-10|CAB02895.2|  169|Caenorhabditis elegans Hypothetical p...    31   0.84 
AF039038-1|AAK21435.1|  877|Caenorhabditis elegans Hypothetical ...    28   5.9  

>Z81055-10|CAB02895.2|  169|Caenorhabditis elegans Hypothetical
           protein F01G10.4 protein.
          Length = 169

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +1

Query: 325 PNQSICLMLRFIKQEVNELKKKTNE--SKITILT 420
           PNQS+C  L +IK E+ +L +  +E  SKI  LT
Sbjct: 82  PNQSVCQNLDYIKTEIGKLNQILHEINSKIIFLT 115


>AF039038-1|AAK21435.1|  877|Caenorhabditis elegans Hypothetical
           protein K06A5.4 protein.
          Length = 877

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 117 TITTETEMKRGCKR*DESEKER 52
           T+  ETE+  GC++  E+EKER
Sbjct: 141 TLADETELTGGCQKNSENEKER 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,969,812
Number of Sequences: 27780
Number of extensions: 262243
Number of successful extensions: 559
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)