Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_E19
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008868-1|AAH08868.1| 463|Homo sapiens NADH dehydrogenase (ubi... 337 2e-92
BC001456-1|AAH01456.1| 463|Homo sapiens NADH dehydrogenase (ubi... 337 2e-92
BC000170-1|AAH00170.1| 463|Homo sapiens NADH dehydrogenase (ubi... 337 2e-92
AL590714-8|CAH72148.1| 463|Homo sapiens NADH dehydrogenase (ubi... 337 2e-92
AF050640-1|AAC27453.1| 463|Homo sapiens NADH-ubiquinone oxidore... 337 2e-92
AF013160-1|AAC34362.1| 463|Homo sapiens NADH dehydrogenase-ubiq... 337 2e-92
AK222618-1|BAD96338.1| 463|Homo sapiens NADH dehydrogenase (ubi... 335 8e-92
AF183173-1|AAG13808.1| 28|Homo sapiens NADH-ubiquinone oxidore... 62 2e-09
X69943-1|CAA49561.1| 100|Homo sapiens GTP binding protein protein. 37 0.050
AJ496551-1|CAD43054.1| 90|Homo sapiens MHC class I antigen pro... 33 0.62
M73999-1|AAB00778.1| 182|Homo sapiens HOX2.8 protein. 33 1.1
AY358755-1|AAQ89115.1| 159|Homo sapiens GRPR5811 protein. 33 1.1
AJ006978-1|CAA07365.1| 182|Homo sapiens B antigen protein. 32 1.4
U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa su... 31 2.5
AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3... 31 2.5
AK130819-1|BAC85438.1| 328|Homo sapiens protein ( Homo sapiens ... 31 2.5
AJ697852-1|CAG26974.1| 90|Homo sapiens MHC class I antigen pro... 31 3.3
U07358-1|AAA67343.1| 859|Homo sapiens serine/threonine protein ... 31 4.3
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 30 5.7
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 30 5.7
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 30 5.7
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 30 5.7
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 30 5.7
AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein. 30 5.7
BC108668-1|AAI08669.1| 477|Homo sapiens TSC1 protein protein. 30 7.6
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 30 7.6
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 30 7.6
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 30 7.6
AL445645-4|CAH72112.1| 1164|Homo sapiens tuberous sclerosis 1 pr... 30 7.6
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 30 7.6
AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein. 30 7.6
AF013168-1|AAC51674.1| 1164|Homo sapiens hamartin protein. 30 7.6
AC004528-2|AAC12680.1| 901|Homo sapiens R32184_2 protein. 30 7.6
>BC008868-1|AAH08868.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 337 bits (829), Expect = 2e-92
Identities = 149/186 (80%), Positives = 169/186 (90%)
Frame = -1
Query: 621 RTKDIGVVTAQDALXYGFSGVMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRY 442
RT DIGVVTA++AL YGFSGVMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRY
Sbjct: 271 RTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRY 330
Query: 441 LCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQ 262
LCRVEEMRQSLRII QCLN MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQ
Sbjct: 331 LCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQ 390
Query: 261 VPPGSTYTAVEAPKGEFGIYLVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAI 82
VPPG+TYTA+EAPKGEFG+YLVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAI
Sbjct: 391 VPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAI 450
Query: 81 IGTLDV 64
IGT D+
Sbjct: 451 IGTQDI 456
>BC001456-1|AAH01456.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 337 bits (829), Expect = 2e-92
Identities = 149/186 (80%), Positives = 169/186 (90%)
Frame = -1
Query: 621 RTKDIGVVTAQDALXYGFSGVMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRY 442
RT DIGVVTA++AL YGFSGVMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRY
Sbjct: 271 RTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRY 330
Query: 441 LCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQ 262
LCRVEEMRQSLRII QCLN MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQ
Sbjct: 331 LCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQ 390
Query: 261 VPPGSTYTAVEAPKGEFGIYLVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAI 82
VPPG+TYTA+EAPKGEFG+YLVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAI
Sbjct: 391 VPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAI 450
Query: 81 IGTLDV 64
IGT D+
Sbjct: 451 IGTQDI 456
>BC000170-1|AAH00170.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 337 bits (829), Expect = 2e-92
Identities = 149/186 (80%), Positives = 169/186 (90%)
Frame = -1
Query: 621 RTKDIGVVTAQDALXYGFSGVMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRY 442
RT DIGVVTA++AL YGFSGVMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRY
Sbjct: 271 RTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRY 330
Query: 441 LCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQ 262
LCRVEEMRQSLRII QCLN MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQ
Sbjct: 331 LCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQ 390
Query: 261 VPPGSTYTAVEAPKGEFGIYLVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAI 82
VPPG+TYTA+EAPKGEFG+YLVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAI
Sbjct: 391 VPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAI 450
Query: 81 IGTLDV 64
IGT D+
Sbjct: 451 IGTQDI 456
>AL590714-8|CAH72148.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 337 bits (829), Expect = 2e-92
Identities = 149/186 (80%), Positives = 169/186 (90%)
Frame = -1
Query: 621 RTKDIGVVTAQDALXYGFSGVMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRY 442
RT DIGVVTA++AL YGFSGVMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRY
Sbjct: 271 RTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRY 330
Query: 441 LCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQ 262
LCRVEEMRQSLRII QCLN MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQ
Sbjct: 331 LCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQ 390
Query: 261 VPPGSTYTAVEAPKGEFGIYLVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAI 82
VPPG+TYTA+EAPKGEFG+YLVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAI
Sbjct: 391 VPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAI 450
Query: 81 IGTLDV 64
IGT D+
Sbjct: 451 IGTQDI 456
>AF050640-1|AAC27453.1| 463|Homo sapiens NADH-ubiquinone
oxidoreductase NDUFS2 subunit protein.
Length = 463
Score = 337 bits (829), Expect = 2e-92
Identities = 149/186 (80%), Positives = 169/186 (90%)
Frame = -1
Query: 621 RTKDIGVVTAQDALXYGFSGVMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRY 442
RT DIGVVTA++AL YGFSGVMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRY
Sbjct: 271 RTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRY 330
Query: 441 LCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQ 262
LCRVEEMRQSLRII QCLN MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQ
Sbjct: 331 LCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQ 390
Query: 261 VPPGSTYTAVEAPKGEFGIYLVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAI 82
VPPG+TYTA+EAPKGEFG+YLVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAI
Sbjct: 391 VPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAI 450
Query: 81 IGTLDV 64
IGT D+
Sbjct: 451 IGTQDI 456
>AF013160-1|AAC34362.1| 463|Homo sapiens NADH
dehydrogenase-ubiquinone Fe-S protein 2 precursor
protein.
Length = 463
Score = 337 bits (829), Expect = 2e-92
Identities = 149/186 (80%), Positives = 169/186 (90%)
Frame = -1
Query: 621 RTKDIGVVTAQDALXYGFSGVMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRY 442
RT DIGVVTA++AL YGFSGVMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRY
Sbjct: 271 RTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRY 330
Query: 441 LCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQ 262
LCRVEEMRQSLRII QCLN MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQ
Sbjct: 331 LCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQ 390
Query: 261 VPPGSTYTAVEAPKGEFGIYLVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAI 82
VPPG+TYTA+EAPKGEFG+YLVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAI
Sbjct: 391 VPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAI 450
Query: 81 IGTLDV 64
IGT D+
Sbjct: 451 IGTQDI 456
>AK222618-1|BAD96338.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 335 bits (823), Expect = 8e-92
Identities = 148/186 (79%), Positives = 168/186 (90%)
Frame = -1
Query: 621 RTKDIGVVTAQDALXYGFSGVMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRY 442
RT DIGVVTA++AL YGFSGVMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRY
Sbjct: 271 RTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRY 330
Query: 441 LCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQ 262
LCRVEEMRQSLRII QCLN MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQ
Sbjct: 331 LCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQ 390
Query: 261 VPPGSTYTAVEAPKGEFGIYLVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAI 82
VPPG+TYTA+EAPKGEFG+YLVSDG S+PYRCKIKAPGFAH A L+K+ + MLAD+VAI
Sbjct: 391 VPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHQAGLDKMSKGHMLADVVAI 450
Query: 81 IGTLDV 64
IGT D+
Sbjct: 451 IGTQDI 456
>AF183173-1|AAG13808.1| 28|Homo sapiens NADH-ubiquinone
oxidoreductase NDUFS2 subunit protein.
Length = 28
Score = 62.1 bits (144), Expect = 2e-09
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 219 GEFGIYLVSDGGSKPYRCKIKAPGFAHL 136
GEFG+YLVSDG S+PYRCKIKAPGFAHL
Sbjct: 1 GEFGVYLVSDGSSRPYRCKIKAPGFAHL 28
>X69943-1|CAA49561.1| 100|Homo sapiens GTP binding protein protein.
Length = 100
Score = 37.1 bits (82), Expect = 0.050
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -3
Query: 418 PVPPHHRAVPQRHAPRGGQDRRRQAHPAIPGGDEDV--HGGADPPLQAVHAGLPGAAGLH 245
PVP HHR PR +Q PA GG V HGG P ++ AG PG AG+H
Sbjct: 1 PVPDHHRLPLVPELPR--HHLPQQEGPA--GGQYPVLTHGGLLPRVRRAPAGRPGGAGVH 56
Query: 244 LHRRGGSQGGVRDLPRL 194
G + R RL
Sbjct: 57 PEDVSGHEPRQRQDHRL 73
>AJ496551-1|CAD43054.1| 90|Homo sapiens MHC class I antigen
protein.
Length = 90
Score = 33.5 bits (73), Expect = 0.62
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -3
Query: 412 PPHHRAVPQRHAPRGGQDRRRQAHPAIPG-----GDEDVHGGADPPLQAVHAGLP 263
P HHR + RH R + RR ++ PG G V G D LQ H LP
Sbjct: 20 PLHHRGLRGRHPVREVRQRRHESEDGAPGAMDRAGGAGVLGPGDTDLQDQHTDLP 74
>M73999-1|AAB00778.1| 182|Homo sapiens HOX2.8 protein.
Length = 182
Score = 32.7 bits (71), Expect = 1.1
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 340 PAIPGGDEDVHGGADPPLQAVHA-GLPGAAGLHLHRRGGSQGGV-RDLPRLRRRLQA 176
PA PG ED+ A+ P A A L G G L GG GG+ R P R L+A
Sbjct: 126 PACPGALEDICDPAEEPAPARAAPALAGGVGSLLSPAGGGAGGLKRGPPAFSRSLRA 182
>AY358755-1|AAQ89115.1| 159|Homo sapiens GRPR5811 protein.
Length = 159
Score = 32.7 bits (71), Expect = 1.1
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -3
Query: 340 PAIPGGDEDVHG--GADPPLQAVHAGLPGAAGLHLHRRGGSQGGVRDLPRLRRRLQAVQM 167
P+ PG V G G P + G P A H+ G + RDL + Q V
Sbjct: 43 PSCPGPPVQVTGVVGPGPSVPGHLCGRPRALLYHVTVEGLALEEGRDLALVGAGFQGVAC 102
Query: 166 QDQGAGLRAPGG 131
Q +GAG PGG
Sbjct: 103 QQEGAGGMGPGG 114
>AJ006978-1|CAA07365.1| 182|Homo sapiens B antigen protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -3
Query: 412 PPHHRAVPQRHAPRGGQDRRRQAHPAIPG-----GDEDVHGGADPPLQAVHAGLP 263
P HHR + RHA R + RR ++ G G V G D LQ H LP
Sbjct: 20 PLHHRGLRGRHAVREVRQRRHESEEGAAGAMDRAGGAGVLGPGDTDLQDQHTDLP 74
>U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 475
Score = 31.5 bits (68), Expect = 2.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 113 GTPCWRTSWPSSGPSTW 63
GTPCW W SS STW
Sbjct: 34 GTPCWLPIWCSSSASTW 50
>AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3B
protein.
Length = 1043
Score = 31.5 bits (68), Expect = 2.5
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -3
Query: 358 RRRQAHPAIPGGDEDVHGGADPPLQAVHAGL-PGAAGLHLHRRGGSQGGVRDLPRLRRRL 182
R R+ A+P G + G PP AGL PG L + R + + D+ +L R
Sbjct: 244 RARRVLEAVPPGPHWLLGTPLPPKALPTAGLPPGLLALGVVARPPLEAAIHDIVQLVARA 303
Query: 181 --QAVQMQDQGAGLRAPGGAGE 122
A Q+Q + A L AP G+
Sbjct: 304 LGSAAQVQPKRALLPAPVNCGD 325
>AK130819-1|BAC85438.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ27309 fis, clone TMS06203. ).
Length = 328
Score = 31.5 bits (68), Expect = 2.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 113 GTPCWRTSWPSSGPSTW 63
GTPCW W SS STW
Sbjct: 276 GTPCWLPIWCSSSASTW 292
>AJ697852-1|CAG26974.1| 90|Homo sapiens MHC class I antigen
protein.
Length = 90
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -3
Query: 412 PPHHRAVPQRHAPRGGQDRRRQAHPAIPG-----GDEDVHGGADPPLQAVHAGLP 263
P HHR + RHA R + RR ++ G G V G D LQ H LP
Sbjct: 20 PLHHRGLRGRHAVREVRQRRHESEEGAAGAMDRAGGALVLGPGDTDLQDQHTDLP 74
>U07358-1|AAA67343.1| 859|Homo sapiens serine/threonine protein
kinase protein.
Length = 859
Score = 30.7 bits (66), Expect = 4.3
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = -3
Query: 400 RAVPQRHAPRGGQDRRRQAHPAIPGGDEDVHGGADPPLQAVHAGLPGAA--GLHLHRRGG 227
R VPQ +P + +A +P D + G P PG + G HR+
Sbjct: 493 RNVPQNLSPHSQRPDILKAESLLPKLDAALSGVGLPGCPKAPPS-PGRSRRGKTRHRKAS 551
Query: 226 SQGGVRDLPRLRRRLQAVQMQDQGAGLRAPGGAG 125
++G DLP LR AV + G G +PGG G
Sbjct: 552 AKGSCGDLPGLR---TAVPPHEPG-GPGSPGGLG 581
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -3
Query: 418 PVPPHHRAVPQRHAPRGGQDRRRQAHPAIPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 239
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 238 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 134
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -3
Query: 418 PVPPHHRAVPQRHAPRGGQDRRRQAHPAIPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 239
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 238 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 134
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -3
Query: 418 PVPPHHRAVPQRHAPRGGQDRRRQAHPAIPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 239
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 238 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 134
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -3
Query: 418 PVPPHHRAVPQRHAPRGGQDRRRQAHPAIPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 239
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 238 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 134
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -3
Query: 418 PVPPHHRAVPQRHAPRGGQDRRRQAHPAIPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 239
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 238 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 134
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein.
Length = 883
Score = 30.3 bits (65), Expect = 5.7
Identities = 29/89 (32%), Positives = 34/89 (38%)
Frame = -3
Query: 400 RAVPQRHAPRGGQDRRRQAHPAIPGGDEDVHGGADPPLQAVHAGLPGAAGLHLHRRGGSQ 221
R P+R G RRR A + G D GG GL L RG
Sbjct: 1 RRRPRRRGRACGTKRRRGACGRL--GGRDGRGGPAAAAALPGPGLAALGRAGLRGRGQRA 58
Query: 220 GGVRDLPRLRRRLQAVQMQDQGAGLRAPG 134
G R L R RRR + + GAG+ A G
Sbjct: 59 EGARGLRRRRRRRRRPGGR-SGAGMAARG 86
>BC108668-1|AAI08669.1| 477|Homo sapiens TSC1 protein protein.
Length = 477
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 366 VKTDDAKLTPPSREEMKTSMEALIH--HFKLFTQGYQVPPGS 247
+ A +TPP +EE S +H H L +G + PPGS
Sbjct: 408 ISLPQATVTPPRKEERMDSARPCLHRQHHLLNDRGSEEPPGS 449
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 7.6
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -3
Query: 397 AVPQRHAPRGGQDRR--RQAHPAIP---GGDEDVHGGADPPLQAVHAGLPGAAGLHLHRR 233
A QR G QD + R A A+ GG ED G D ++A G G L H +
Sbjct: 136 AAQQRDCTMGNQDGKLKRSAGDALHEGGGGAEDALGPRD--VEATKKGSGGKKALGKHGK 193
Query: 232 GGSQGG 215
GG GG
Sbjct: 194 GGGGGG 199
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 7.6
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -3
Query: 397 AVPQRHAPRGGQDRR--RQAHPAIP---GGDEDVHGGADPPLQAVHAGLPGAAGLHLHRR 233
A QR G QD + R A A+ GG ED G D ++A G G L H +
Sbjct: 136 AAQQRDCTMGNQDGKLKRSAGDALHEGGGGAEDALGPRD--VEATKKGSGGKKALGKHGK 193
Query: 232 GGSQGG 215
GG GG
Sbjct: 194 GGGGGG 199
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 7.6
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -3
Query: 397 AVPQRHAPRGGQDRR--RQAHPAIP---GGDEDVHGGADPPLQAVHAGLPGAAGLHLHRR 233
A QR G QD + R A A+ GG ED G D ++A G G L H +
Sbjct: 136 AAQQRDCTMGNQDGKLKRSAGDALHEGGGGAEDALGPRD--VEATKKGSGGKKALGKHGK 193
Query: 232 GGSQGG 215
GG GG
Sbjct: 194 GGGGGG 199
>AL445645-4|CAH72112.1| 1164|Homo sapiens tuberous sclerosis 1
protein.
Length = 1164
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 366 VKTDDAKLTPPSREEMKTSMEALIH--HFKLFTQGYQVPPGS 247
+ A +TPP +EE S +H H L +G + PPGS
Sbjct: 409 ISLPQATVTPPRKEERMDSARPCLHRQHHLLNDRGSEEPPGS 450
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 7.6
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -3
Query: 397 AVPQRHAPRGGQDRR--RQAHPAIP---GGDEDVHGGADPPLQAVHAGLPGAAGLHLHRR 233
A QR G QD + R A A+ GG ED G D ++A G G L H +
Sbjct: 136 AAQQRDCTMGNQDGKLKRSAGDALHEGGGGAEDALGPRD--VEATKKGSGGKKALGKHGK 193
Query: 232 GGSQGG 215
GG GG
Sbjct: 194 GGGGGG 199
>AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.
Length = 1619
Score = 29.9 bits (64), Expect = 7.6
Identities = 25/71 (35%), Positives = 28/71 (39%)
Frame = -3
Query: 418 PVPPHHRAVPQRHAPRGGQDRRRQAHPAIPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 239
P PP PQ A GGQ R +AHP+ G E + P A A L G A L
Sbjct: 4 PAPPSSLPAPQGKAGPGGQ-RAVRAHPSRAGPAE--RAASVPLTMAAAALLLGLALLAPR 60
Query: 238 RRGGSQGGVRD 206
G G D
Sbjct: 61 AAGAGMGACYD 71
>AF013168-1|AAC51674.1| 1164|Homo sapiens hamartin protein.
Length = 1164
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 366 VKTDDAKLTPPSREEMKTSMEALIH--HFKLFTQGYQVPPGS 247
+ A +TPP +EE S +H H L +G + PPGS
Sbjct: 409 ISLPQATVTPPRKEERMDSARPCLHRQHHLLNDRGSEEPPGS 450
>AC004528-2|AAC12680.1| 901|Homo sapiens R32184_2 protein.
Length = 901
Score = 29.9 bits (64), Expect = 7.6
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = -3
Query: 358 RRRQAHPAIPGGDEDVHGGADPPLQAVHAGL-PGAAGLHLHRRGGSQGGVRDLPRLRRRL 182
R R+ A+P G + G PP AGL PG L R + + D+ +L R
Sbjct: 244 RARRVLEAVPPGPHWLLGTPLPPKALPTAGLPPGLLALGEVARPPLEAAIHDIVQLVARA 303
Query: 181 --QAVQMQDQGAGLRAPGGAGE 122
A Q+Q + A L AP G+
Sbjct: 304 LGSAAQVQPKRALLPAPVNCGD 325
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,519,019
Number of Sequences: 237096
Number of extensions: 2282789
Number of successful extensions: 18833
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 15559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18798
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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